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Cofit
Protein
Homologs
Top cofit genes for HSERO_RS02045 from
Herbaspirillum seropedicae SmR1
toxin HipA
SEED: HipA protein
Rank
Hit
Name
Description
Conserved?
Cofitness
1
HSERO
_RS09475
Fis family transcriptional regulator
no
0.40
2
HSERO
_RS19730
short-chain dehydrogenase
no
0.37
3
HSERO
_RS00850
TonB-dependent receptor
no
0.37
4
HSERO
_RS07075
cysteine hydrolase
no
0.35
5
HSERO
_RS03785
type VI secretion protein VasK
0.23
0.35
6
HSERO
_RS13090
ABC transporter permease
no
0.34
7
HSERO
_RS04900
hypothetical protein
no
0.34
8
HSERO
_RS20775
membrane protein
no
0.34
9
HSERO
_RS05785
MFS transporter
0.44
0.34
10
HSERO
_RS09470
acetaldehyde dehydrogenase
no
0.34
11
HSERO
_RS12500
malto-oligosyltrehalose trehalohydrolase
no
0.34
12
HSERO
_RS07150
apolipoprotein acyltransferase
0.59
0.33
13
HSERO
_RS10785
N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
no
0.32
14
HSERO
_RS09530
hypothetical protein
no
0.32
15
HSERO
_RS21410
NAD-dependent dehydratase
0.32
0.32
16
HSERO
_RS13825
hypothetical protein
no
0.32
17
HSERO
_RS06310
phosphate ABC transporter substrate-binding protein
0.53
0.32
18
HSERO
_RS23075
methyl-accepting chemotaxis protein
0.62
0.32
19
HSERO
_RS19640
glucan biosynthesis protein D
0.43
0.31
20
HSERO
_RS07655
nodulation protein
no
0.31
Or look for
negative cofitness