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Cofit
Protein
Homologs
Top cofit genes for HSERO_RS01190 from
Herbaspirillum seropedicae SmR1
amino acid ABC transporter ATP-binding protein
Rank
Hit
Name
Description
Conserved?
Cofitness
1
HSERO
_RS09210
D-aminopeptidase
no
0.45
2
HSERO
_RS01210
GntR family transcriptional regulator
no
0.43
3
HSERO
_RS23035
ABC transporter permease
no
0.39
4
HSERO
_RS03800
hypothetical protein
no
0.39
5
HSERO
_RS18745
methyl-accepting chemotaxis protein
no
0.38
6
HSERO
_RS03690
membrane protein
no
0.38
7
HSERO
_RS07630
histidine kinase
no
0.37
8
HSERO
_RS12105
RpiR family transcriptional regulator
no
0.37
9
HSERO
_RS03675
type VI secretion protein
no
0.37
10
HSERO
_RS22790
type I restriction-modification protein subunit M
no
0.36
11
HSERO
_RS07725
membrane protein
no
0.36
12
HSERO
_RS03685
type VI secretion protein
no
0.35
13
HSERO
_RS17810
glycosyl transferase
no
0.35
14
HSERO
_RS15945
peptide ABC transporter permease
no
0.35
15
HSERO
_RS22275
2-pyrone-4,6-dicarboxylate hydrolase
no
0.35
16
HSERO
_RS17815
glycosyl transferase
no
0.35
17
HSERO
_RS05395
succinate-semialdehyde dehdyrogenase
no
0.34
18
HSERO
_RS03785
type VI secretion protein VasK
no
0.34
19
HSERO
_RS04820
C4-dicarboxylate ABC transporter
no
0.34
20
HSERO
_RS02100
4-oxalocrotonate decarboxylase
no
0.34
Or look for
negative cofitness