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Cofit
Protein
Homologs
Top cofit genes for HSERO_RS01125 from
Herbaspirillum seropedicae SmR1
bacteriophage transcription regulator protein
Rank
Hit
Name
Description
Conserved?
Cofitness
1
HSERO
_RS10085
transcriptional regulator
no
0.37
2
HSERO
_RS19970
branched-chain amino acid ABC transporter
no
0.29
3
HSERO
_RS04775
ABC transporter permease
no
0.28
4
HSERO
_RS11275
membrane protein
no
0.27
5
HSERO
_RS18055
histidine kinase
no
0.27
6
HSERO
_RS05700
LysR family transcriptional regulator
no
0.26
7
HSERO
_RS15850
methyl-accepting chemotaxis protein
no
0.26
8
HSERO
_RS17005
ABC transporter for D-sorbitol/xylitol, permease component 1
(from data)
no
0.25
9
HSERO
_RS19725
glycosyl hydrolase
no
0.25
10
HSERO
_RS05765
salicylaldehyde dehydrogenase
no
0.25
11
HSERO
_RS05495
hypothetical protein
no
0.24
12
HSERO
_RS08990
heat shock protein 90
no
0.24
13
HSERO
_RS15130
MaoC family dehydratase
no
0.24
14
HSERO
_RS15920
hypothetical protein
no
0.24
15
HSERO
_RS07135
methyltransferase
no
0.24
16
HSERO
_RS14020
LysR family transcriptional regulator
no
0.24
17
HSERO
_RS11230
ABC transporter permease
no
0.24
18
HSERO
_RS13770
polysaccharide deacetylase
no
0.23
19
HSERO
_RS15970
peptidase
no
0.23
20
HSERO
_RS01405
diguanylate cyclase
no
0.23
Or look for
negative cofitness