Top cofit genes for HMPREF1078_RS16740 from Parabacteroides merdae CL09T00C40

rRNA cytosine-C5-methyltransferase
SEED: tRNA and rRNA cytosine-C5-methylases

Rank	Hit	Name	Description	Conserved?	Cofitness
1	HMPREF1078_RS02015		23S rRNA (guanosine(2251)-2'-O)-methyltransferase RlmB	0.43	0.49
2	HMPREF1078_RS10685		tRNA (N(6)-L-threonylcarbamoyladenosine(37)-C(2))- methylthiotransferase MtaB	0.37	0.48
3	HMPREF1078_RS04525		hypothetical protein	no	0.47
4	HMPREF1078_RS17060		RNA-binding protein	0.61	0.47
5	HMPREF1078_RS05165		GSCFA domain-containing protein	0.67	0.46
6	HMPREF1078_RS09180		DUF1911 domain-containing protein	no	0.43
7	HMPREF1078_RS15475		GTPase ObgE	no	0.43
8	HMPREF1078_RS06950		TonB-dependent receptor	no	0.42
9	HMPREF1078_RS06875		DUF3316 domain-containing protein	no	0.40
10	HMPREF1078_RS15605		DNA-binding domain-containing protein	no	0.40
11	HMPREF1078_RS00875		MATE family efflux transporter	no	0.40
12	HMPREF1078_RS01800		BlaI/MecI/CopY family transcriptional regulator	no	0.39
13	HMPREF1078_RS08965		dihydrofolate reductase family protein	no	0.37
14	HMPREF1078_RS13230		hypothetical protein	no	0.37
15	HMPREF1078_RS09165		hypothetical protein	no	0.37
16	HMPREF1078_RS10885		tyrosine recombinase XerC	no	0.36
17	HMPREF1078_RS15125		16S rRNA (guanine(527)-N(7))-methyltransferase RsmG	no	0.36
18	HMPREF1078_RS11855		glycoside hydrolase family 2 TIM barrel-domain containing protein	no	0.36
19	HMPREF1078_RS08300		hypothetical protein	no	0.36
20	HMPREF1078_RS06215		AGE family epimerase/isomerase	no	0.36

Or look for negative cofitness