Top cofit genes for HMPREF1078_RS16280 from Parabacteroides merdae CL09T00C40

Arm DNA-binding domain-containing protein
SEED: Tyrosine type site-specific recombinase

Rank	Hit	Name	Description	Conserved?	Cofitness
1	HMPREF1078_RS07175		lipopolysaccharide kinase InaA family protein	no	0.55
2	HMPREF1078_RS16045		acyltransferase	no	0.47
3	HMPREF1078_RS06540		hypothetical protein	no	0.47
4	HMPREF1078_RS11470		sulfatase	no	0.47
5	HMPREF1078_RS13815		SIR2 family protein	no	0.46
6	HMPREF1078_RS14525		SurA N-terminal domain-containing protein	no	0.44
7	HMPREF1078_RS07310		methionine--tRNA ligase	no	0.44
8	HMPREF1078_RS01495		hypothetical protein	no	0.44
9	HMPREF1078_RS11750		hypothetical protein	no	0.44
10	HMPREF1078_RS07160		DUF4254 domain-containing protein	no	0.43
11	HMPREF1078_RS12375		DUF1573 domain-containing protein	no	0.43
12	HMPREF1078_RS05000		TonB-dependent receptor	no	0.43
13	HMPREF1078_RS06690		RagB/SusD family nutrient uptake outer membrane protein	no	0.42
14	HMPREF1078_RS02625		glycosyltransferase family 4 protein	no	0.42
15	HMPREF1078_RS13770		IS256 family transposase	no	0.42
16	HMPREF1078_RS11355		DEAD/DEAH box helicase family protein	no	0.42
17	HMPREF1078_RS12360		hypothetical protein	no	0.42
18	HMPREF1078_RS10960		efflux RND transporter periplasmic adaptor subunit	no	0.42
19	HMPREF1078_RS17440		hypothetical protein	no	0.41
20	HMPREF1078_RS07165		glycosyltransferase family 9 protein	no	0.41

Or look for negative cofitness