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Cofit
Protein
Homologs
Top cofit genes for HMPREF1078_RS15655 from
Parabacteroides merdae CL09T00C40
hypothetical protein
Rank
Hit
Name
Description
Conserved?
Cofitness
1
HMPREF1078
_RS06725
YitT family protein
no
0.56
2
HMPREF1078
_RS03315
conjugative transposon protein TraK
no
0.50
3
HMPREF1078
_RS15600
hypothetical protein
no
0.49
4
HMPREF1078
_RS01380
M48 family metallopeptidase
no
0.49
5
HMPREF1078
_RS08995
conjugal transfer protein MobA
no
0.49
6
HMPREF1078
_RS07620
oligopeptide transporter, OPT family
no
0.48
7
HMPREF1078
_RS07490
alpha/beta hydrolase family protein
no
0.47
8
HMPREF1078
_RS06590
sulfatase
no
0.47
9
HMPREF1078
_RS10260
CBS domain-containing protein
no
0.47
10
HMPREF1078
_RS15055
CRISPR-associated helicase/endonuclease Cas3
no
0.45
11
HMPREF1078
_RS09565
alpha-L-fucosidase
no
0.45
12
HMPREF1078
_RS06505
ABC transporter ATP-binding protein
no
0.44
13
HMPREF1078
_RS17220
TIGR04133 family radical SAM/SPASM protein
no
0.44
14
HMPREF1078
_RS05975
HlyD family efflux transporter periplasmic adaptor subunit
no
0.43
15
HMPREF1078
_RS00470
lipoyl(octanoyl) transferase LipB
no
0.43
16
HMPREF1078
_RS11580
cyclodeaminase/cyclohydrolase family protein
no
0.43
17
HMPREF1078
_RS07860
methylenetetrahydrofolate reductase [NAD(P)H]
no
0.42
18
HMPREF1078
_RS06240
TIGR00730 family Rossman fold protein
no
0.41
19
HMPREF1078
_RS15905
50S ribosomal protein L11 methyltransferase
no
0.41
20
HMPREF1078
_RS04565
GNAT family N-acetyltransferase
no
0.41
Or look for
negative cofitness