Top cofit genes for HMPREF1078_RS15135 from Parabacteroides merdae CL09T00C40

FAD:protein FMN transferase
SEED: thiamine biosynthesis lipoprotein ApbE

Rank	Hit	Name	Description	Conserved?	Cofitness
1	HMPREF1078_RS06265		spore maturation protein	no	0.53
2	HMPREF1078_RS01720		PCMD domain-containing protein	no	0.49
3	HMPREF1078_RS15150		glycoside hydrolase family 127 protein	no	0.49
4	HMPREF1078_RS14030		TonB-dependent receptor	no	0.46
5	HMPREF1078_RS08185		cation:proton antiporter	no	0.45
6	HMPREF1078_RS04295		response regulator transcription factor	no	0.45
7	HMPREF1078_RS03785		cyclophilin-like fold protein	no	0.45
8	HMPREF1078_RS13225		DUF6340 family protein	no	0.44
9	HMPREF1078_RS11995		DUF3575 domain-containing protein	no	0.43
10	HMPREF1078_RS09915		glycoside hydrolase family 88 protein	no	0.43
11	HMPREF1078_RS04770		MmcQ/YjbR family DNA-binding protein	no	0.43
12	HMPREF1078_RS09535		ABC transporter ATP-binding protein	no	0.42
13	HMPREF1078_RS02615		glycosyltransferase family 4 protein	no	0.42
14	HMPREF1078_RS08020		phosphatidylglycerol lysyltransferase domain-containing protein	no	0.42
15	HMPREF1078_RS01560		glycosyltransferase family 4 protein	no	0.41
16	HMPREF1078_RS14475		hypothetical protein	no	0.41
17	HMPREF1078_RS13905		flotillin-like protein FloA	no	0.41
18	HMPREF1078_RS04300		beta-glucosidase	no	0.41
19	HMPREF1078_RS09060		conjugative transposon protein TraM	no	0.40
20	HMPREF1078_RS15245		DUF4290 domain-containing protein	no	0.40

Or look for negative cofitness