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  • Top cofit genes for HMPREF1078_RS14940 from Parabacteroides merdae CL09T00C40

    hypothetical protein
    SEED: FIG00897247: hypothetical protein

    Rank Hit Name Description Conserved? Cofitness  
    1 HMPREF1078_RS10105 TolC family protein no 0.73
    2 HMPREF1078_RS14735 endolytic transglycosylase MltG no 0.72
    3 HMPREF1078_RS14440 phosphatase PAP2 family protein no 0.71
    4 HMPREF1078_RS04130 hypothetical protein no 0.71
    5 HMPREF1078_RS10090 ABC transporter permease no 0.70
    6 HMPREF1078_RS10100 efflux RND transporter periplasmic adaptor subunit no 0.70
    7 HMPREF1078_RS07485 formate--tetrahydrofolate ligase no 0.69
    8 HMPREF1078_RS14455 TolC family protein no 0.69
    9 HMPREF1078_RS03485 phosphomethylpyrimidine synthase ThiC no 0.68
    10 HMPREF1078_RS10095 ABC transporter permease no 0.67
    11 HMPREF1078_RS00765 FecR domain-containing protein no 0.67
    12 HMPREF1078_RS08785 DUF3943 domain-containing protein no 0.66
    13 HMPREF1078_RS06980 tRNA threonylcarbamoyladenosine dehydratase no 0.66
    14 HMPREF1078_RS10775 alpha/beta hydrolase no 0.66
    15 HMPREF1078_RS06815 VTT domain-containing protein no 0.66
    16 HMPREF1078_RS10110 Crp/Fnr family transcriptional regulator no 0.65
    17 HMPREF1078_RS12520 F0F1 ATP synthase subunit alpha no 0.65
    18 HMPREF1078_RS13130 Fur family transcriptional regulator no 0.65
    19 HMPREF1078_RS01905 hemolysin III family protein no 0.65
    20 HMPREF1078_RS04310 LysE family transporter no 0.64

    Or look for negative cofitness