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  • Top cofit genes for HMPREF1078_RS12385 from Parabacteroides merdae CL09T00C40

    hypothetical protein

    Rank Hit Name Description Conserved? Cofitness  
    1 HMPREF1078_RS13610 FecR domain-containing protein no 0.59
    2 HMPREF1078_RS14205 bifunctional demethylmenaquinone methyltransferase/2-methoxy-6-polyprenyl-1,4-benzoquinol methylase UbiE no 0.58
    3 HMPREF1078_RS09425 hypothetical protein no 0.56
    4 HMPREF1078_RS04665 16S rRNA (cytosine(1402)-N(4))-methyltransferase RsmH no 0.56
    5 HMPREF1078_RS04785 nucleoside deaminase no 0.56
    6 HMPREF1078_RS11820 M28 family peptidase no 0.55
    7 HMPREF1078_RS19150 4-phosphoerythronate dehydrogenase PdxB no 0.54
    8 HMPREF1078_RS07160 DUF4254 domain-containing protein no 0.53
    9 HMPREF1078_RS17540 glycosyltransferase family 2 protein no 0.53
    10 HMPREF1078_RS07275 DUF4493 domain-containing protein no 0.52
    11 HMPREF1078_RS04780 hypothetical protein no 0.52
    12 HMPREF1078_RS16255 ABC transporter permease no 0.52
    13 HMPREF1078_RS07845 pyruvate:ferredoxin (flavodoxin) oxidoreductase no 0.50
    14 HMPREF1078_RS09715 3-methyl-2-oxobutanoate hydroxymethyltransferase no 0.50
    15 HMPREF1078_RS04435 ParB/RepB/Spo0J family partition protein no 0.50
    16 HMPREF1078_RS11135 hypothetical protein no 0.50
    17 HMPREF1078_RS07265 DUF4493 domain-containing protein no 0.50
    18 HMPREF1078_RS13855 restriction endonuclease no 0.50
    19 HMPREF1078_RS07165 glycosyltransferase family 9 protein no 0.49
    20 HMPREF1078_RS04420 RelA/SpoT family protein no 0.49

    Or look for negative cofitness