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Cofit
Protein
Homologs
Top cofit genes for HMPREF1078_RS12385 from
Parabacteroides merdae CL09T00C40
hypothetical protein
Rank
Hit
Name
Description
Conserved?
Cofitness
1
HMPREF1078
_RS04785
nucleoside deaminase
no
0.70
2
HMPREF1078
_RS13610
FecR domain-containing protein
no
0.65
3
HMPREF1078
_RS14685
aspartate 1-decarboxylase
no
0.59
4
HMPREF1078
_RS04995
RagB/SusD family nutrient uptake outer membrane protein
no
0.58
5
HMPREF1078
_RS06685
TonB-dependent receptor
no
0.58
6
HMPREF1078
_RS14205
bifunctional demethylmenaquinone methyltransferase/2-methoxy-6-polyprenyl-1,4-benzoquinol methylase UbiE
no
0.57
7
HMPREF1078
_RS00100
thioredoxin-dependent thiol peroxidase
no
0.56
8
HMPREF1078
_RS01520
glycosyltransferase
no
0.56
9
HMPREF1078
_RS12040
fimbrial protein
no
0.56
10
HMPREF1078
_RS11375
DUF4595 domain-containing protein
no
0.56
11
HMPREF1078
_RS09425
hypothetical protein
no
0.56
12
HMPREF1078
_RS13795
hypothetical protein
no
0.55
13
HMPREF1078
_RS14075
glycosyltransferase
no
0.55
14
HMPREF1078
_RS11820
M28 family peptidase
no
0.54
15
HMPREF1078
_RS11665
diaminopimelate dehydrogenase
no
0.54
16
HMPREF1078
_RS13810
helix-turn-helix transcriptional regulator
no
0.54
17
HMPREF1078
_RS15300
biotin synthase BioB
no
0.54
18
HMPREF1078
_RS07280
PCMD domain-containing protein
no
0.53
19
HMPREF1078
_RS07275
DUF4493 domain-containing protein
no
0.53
20
HMPREF1078
_RS11135
hypothetical protein
no
0.53
Or look for
negative cofitness