Top cofit genes for HMPREF1078_RS10885 from Parabacteroides merdae CL09T00C40

tyrosine recombinase XerC
SEED: Integrase, site-specific recombinase
KEGG: integrase/recombinase XerC

Rank Hit Name Description Conserved? Cofitness  
1 HMPREF1078_RS10880 ribosome-associated translation inhibitor RaiA 0.52 0.71
2 HMPREF1078_RS12605 BamA/TamA family outer membrane protein 0.29 0.67
3 HMPREF1078_RS12600 translocation/assembly module TamB domain-containing protein 0.34 0.65
4 HMPREF1078_RS04880 16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))- dimethyltransferase RsmA 0.51 0.63
5 HMPREF1078_RS18125 LicD family protein no 0.63
6 HMPREF1078_RS08035 magnesium transporter CorA family protein 0.24 0.61
7 HMPREF1078_RS16175 diacylglycerol kinase family lipid kinase no 0.58
8 HMPREF1078_RS18135 ornithine cyclodeaminase no 0.57
9 HMPREF1078_RS18115 glycosyltransferase family 4 protein no 0.57
10 HMPREF1078_RS14525 SurA N-terminal domain-containing protein no 0.56
11 HMPREF1078_RS07200 viroplasmin family protein no 0.56
12 HMPREF1078_RS18140 aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme no 0.55
13 HMPREF1078_RS19835 hypothetical protein no 0.53
14 HMPREF1078_RS06950 TonB-dependent receptor no 0.52
15 HMPREF1078_RS09180 DUF1911 domain-containing protein no 0.52
16 HMPREF1078_RS13185 cytochrome c biogenesis protein CcdA no 0.52
17 HMPREF1078_RS11750 hypothetical protein no 0.51
18 HMPREF1078_RS15270 RIP metalloprotease RseP no 0.50
19 HMPREF1078_RS10685 tRNA (N(6)-L-threonylcarbamoyladenosine(37)-C(2))- methylthiotransferase MtaB 0.33 0.50
20 HMPREF1078_RS07160 DUF4254 domain-containing protein no 0.50

Or look for negative cofitness