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Cofit
Protein
Homologs
Top cofit genes for HMPREF1078_RS09375 from
Parabacteroides merdae CL09T00C40
hypothetical protein
Rank
Hit
Name
Description
Conserved?
Cofitness
1
HMPREF1078
_RS11930
VOC family protein
no
0.62
2
HMPREF1078
_RS11655
FprA family A-type flavoprotein
0.67
0.61
3
HMPREF1078
_RS01140
hydrogen peroxide-inducible genes activator
no
0.59
4
HMPREF1078
_RS12565
TonB-dependent receptor
no
0.58
5
HMPREF1078
_RS05175
SDR family oxidoreductase
no
0.58
6
HMPREF1078
_RS13425
sugar phosphate isomerase/epimerase
no
0.57
7
HMPREF1078
_RS00680
glycoside hydrolase family 97 protein
no
0.57
8
HMPREF1078
_RS11290
peptide chain release factor N(5)-glutamine methyltransferase
no
0.56
9
HMPREF1078
_RS02300
alpha-galactosidase
no
0.56
10
HMPREF1078
_RS11690
TonB-dependent receptor
no
0.56
11
HMPREF1078
_RS01300
carbamoyl-phosphate synthase (glutamine-hydrolyzing) large subunit
no
0.55
12
HMPREF1078
_RS16335
hybrid sensor histidine kinase/response regulator transcription factor
no
0.55
13
HMPREF1078
_RS07770
GH92 family glycosyl hydrolase
no
0.54
14
HMPREF1078
_RS12625
hybrid sensor histidine kinase/response regulator transcription factor
no
0.54
15
HMPREF1078
_RS16345
RagB/SusD family nutrient uptake outer membrane protein
no
0.53
16
HMPREF1078
_RS17700
HAMP domain-containing sensor histidine kinase
no
0.53
17
HMPREF1078
_RS01110
DNA topoisomerase 3
no
0.53
18
HMPREF1078
_RS04980
hypothetical protein
no
0.53
19
HMPREF1078
_RS05415
PD40 domain-containing protein
no
0.53
20
HMPREF1078
_RS04885
magnesium transporter
no
0.53
Or look for
negative cofitness