Top cofit genes for HMPREF1078_RS09285 from Parabacteroides merdae CL09T00C40

hypothetical protein
SEED: Conjugative transposon protein TraD

Rank	Hit	Name	Description	Conserved?	Cofitness
1	HMPREF1078_RS14435		DNA-binding domain-containing protein	no	0.63
2	HMPREF1078_RS13280		Gfo/Idh/MocA family oxidoreductase	no	0.61
3	HMPREF1078_RS11295		regulatory protein RecX	no	0.59
4	HMPREF1078_RS14440		phosphatase PAP2 family protein	no	0.56
5	HMPREF1078_RS04565		GNAT family N-acetyltransferase	no	0.55
6	HMPREF1078_RS02690		hypothetical protein	no	0.54
7	HMPREF1078_RS19710		hypothetical protein	no	0.54
8	HMPREF1078_RS14960		DUF3810 domain-containing protein	no	0.53
9	HMPREF1078_RS05185		dNTP triphosphohydrolase	no	0.53
10	HMPREF1078_RS09560		glycoside hydrolase family 88 protein	no	0.53
11	HMPREF1078_RS09335		conjugative transposon protein TraM	no	0.52
12	HMPREF1078_RS05590		RagB/SusD family nutrient uptake outer membrane protein	no	0.52
13	HMPREF1078_RS18740		fluoride efflux transporter CrcB	no	0.51
14	HMPREF1078_RS08885		TetR/AcrR family transcriptional regulator	no	0.51
15	HMPREF1078_RS08785		DUF3943 domain-containing protein	no	0.51
16	HMPREF1078_RS15040		outer membrane beta-barrel family protein	no	0.51
17	HMPREF1078_RS07140		nucleotidyltransferase domain-containing protein	no	0.51
18	HMPREF1078_RS06030		beta-N-acetylhexosaminidase	no	0.51
19	HMPREF1078_RS08755		tRNA-Lys	no	0.51
20	HMPREF1078_RS10420		glycine cleavage system aminomethyltransferase GcvT	no	0.50

Or look for negative cofitness