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Cofit
Protein
Homologs
Top cofit genes for HMPREF1078_RS09185 from
Parabacteroides merdae CL09T00C40
hypothetical protein
Rank
Hit
Name
Description
Conserved?
Cofitness
1
HMPREF1078
_RS06335
DNA polymerase I
no
0.50
2
HMPREF1078
_RS09175
hypothetical protein
no
0.47
3
HMPREF1078
_RS06955
RagB/SusD family nutrient uptake outer membrane protein
no
0.46
4
HMPREF1078
_RS06950
TonB-dependent receptor
no
0.42
5
HMPREF1078
_RS09170
hypothetical protein
no
0.41
6
HMPREF1078
_RS11040
zeta toxin family protein
no
0.39
7
HMPREF1078
_RS08035
magnesium transporter CorA family protein
no
0.37
8
HMPREF1078
_RS02800
hypothetical protein
no
0.37
9
HMPREF1078
_RS19490
restriction endonuclease subunit S
no
0.36
10
HMPREF1078
_RS09180
DUF1911 domain-containing protein
no
0.36
11
HMPREF1078
_RS09190
hypothetical protein
no
0.36
12
HMPREF1078
_RS02410
ATP-binding cassette domain-containing protein
no
0.36
13
HMPREF1078
_RS03820
helix-turn-helix domain-containing protein
no
0.36
14
HMPREF1078
_RS19875
hypothetical protein
no
0.35
15
HMPREF1078
_RS08185
cation:proton antiporter
no
0.34
16
HMPREF1078
_RS01370
alkaline phosphatase
no
0.34
17
HMPREF1078
_RS19190
MBL fold metallo-hydrolase
no
0.34
18
HMPREF1078
_RS19770
hypothetical protein
no
0.34
19
HMPREF1078
_RS04495
cytochrome d ubiquinol oxidase subunit II
no
0.33
20
HMPREF1078
_RS08965
dihydrofolate reductase family protein
no
0.33
Or look for
negative cofitness