Top cofit genes for HMPREF1078_RS09010 from Parabacteroides merdae CL09T00C40

DUF3408 domain-containing protein
SEED: Conjugative transposon protein TraC

Rank	Hit	Name	Description	Conserved?	Cofitness
1	HMPREF1078_RS00775		carboxypeptidase-like regulatory domain-containing protein	no	0.47
2	HMPREF1078_RS09380		hypothetical protein	no	0.45
3	HMPREF1078_RS08060		AAA domain-containing protein	no	0.42
4	HMPREF1078_RS03495		hypothetical protein	no	0.39
5	HMPREF1078_RS03645		hypothetical protein	no	0.38
6	HMPREF1078_RS09735		DMT family transporter	no	0.38
7	HMPREF1078_RS01675		2-hydroxyacid dehydrogenase	no	0.37
8	HMPREF1078_RS03780		DapH/DapD/GlmU-related protein	no	0.37
9	HMPREF1078_RS08160		transposase	no	0.37
10	HMPREF1078_RS15040		outer membrane beta-barrel family protein	no	0.37
11	HMPREF1078_RS00765		FecR domain-containing protein	no	0.37
12	HMPREF1078_RS02480		mechanosensitive ion channel	no	0.36
13	HMPREF1078_RS01785		alpha-L-rhamnosidase C-terminal domain-containing protein	no	0.35
14	HMPREF1078_RS02690		hypothetical protein	no	0.35
15	HMPREF1078_RS02105		AMP-binding protein	no	0.35
16	HMPREF1078_RS09555		ATP-binding protein	no	0.35
17	HMPREF1078_RS08755		tRNA-Lys	no	0.34
18	HMPREF1078_RS04750		RNA polymerase sigma-70 factor	no	0.34
19	HMPREF1078_RS16115		hypothetical protein	no	0.34
20	HMPREF1078_RS06425		DUF4252 domain-containing protein	no	0.34

Or look for negative cofitness