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Cofit
Protein
Homologs
Top cofit genes for HMPREF1078_RS08055 from
Parabacteroides merdae CL09T00C40
glycine zipper family protein
Rank
Hit
Name
Description
Conserved?
Cofitness
1
HMPREF1078
_RS18325
HAMP domain-containing sensor histidine kinase
no
0.56
2
HMPREF1078
_RS04870
aminoacyl-histidine dipeptidase
no
0.54
3
HMPREF1078
_RS09895
glycoside hydrolase family 2 TIM barrel-domain containing protein
0.24
0.52
4
HMPREF1078
_RS15955
winged helix DNA-binding protein
no
0.52
5
HMPREF1078
_RS04125
16S rRNA (cytidine(1402)-2'-O)-methyltransferase
no
0.51
6
HMPREF1078
_RS07720
PD-(D/E)XK nuclease family protein
no
0.51
7
HMPREF1078
_RS11485
SagB/ThcOx family dehydrogenase
no
0.50
8
HMPREF1078
_RS05915
ATP-binding protein
no
0.50
9
HMPREF1078
_RS00880
cytidylate kinase-like family protein
no
0.49
10
HMPREF1078
_RS16350
basic secretory protein-like protein
no
0.49
11
HMPREF1078
_RS13680
malate dehydrogenase
0.29
0.49
12
HMPREF1078
_RS15490
phenylalanine--tRNA ligase beta subunit-related protein
0.53
0.47
13
HMPREF1078
_RS13195
TlpA disulfide reductase family protein
no
0.46
14
HMPREF1078
_RS09695
HigA family addiction module antitoxin
no
0.46
15
HMPREF1078
_RS16200
DUF5606 domain-containing protein
no
0.45
16
HMPREF1078
_RS14900
S41 family peptidase
0.54
0.45
17
HMPREF1078
_RS04420
RelA/SpoT family protein
no
0.45
18
HMPREF1078
_RS17175
phosphate ABC transporter permease subunit PstC
no
0.45
19
HMPREF1078
_RS15005
biosynthetic arginine decarboxylase
no
0.45
20
HMPREF1078
_RS14075
glycosyltransferase
no
0.45
Or look for
negative cofitness