Top cofit genes for HMPREF1078_RS08005 from Parabacteroides merdae CL09T00C40

efflux RND transporter periplasmic adaptor subunit

Rank	Hit	Name	Description	Conserved?	Cofitness
1	HMPREF1078_RS00775		carboxypeptidase-like regulatory domain-containing protein	no	0.53
2	HMPREF1078_RS16630		mechanosensitive ion channel	no	0.51
3	HMPREF1078_RS09765		CinA family protein	no	0.51
4	HMPREF1078_RS09135		hypothetical protein	no	0.49
5	HMPREF1078_RS11785		DNA repair protein RecO	no	0.49
6	HMPREF1078_RS06535		helix-hairpin-helix domain-containing protein	no	0.48
7	HMPREF1078_RS13675		DUF1080 domain-containing protein	no	0.48
8	HMPREF1078_RS02095		TonB-dependent receptor	no	0.47
9	HMPREF1078_RS10665		outer membrane beta-barrel family protein	no	0.47
10	HMPREF1078_RS13190		RluA family pseudouridine synthase	no	0.47
11	HMPREF1078_RS12565		TonB-dependent receptor	no	0.47
12	HMPREF1078_RS07770		GH92 family glycosyl hydrolase	no	0.47
13	HMPREF1078_RS08210		class I fructose-bisphosphate aldolase	no	0.46
14	HMPREF1078_RS04980		hypothetical protein	no	0.46
15	HMPREF1078_RS01565		sugar transferase	no	0.46
16	HMPREF1078_RS05890		SMP-30/gluconolactonase/LRE family protein	no	0.46
17	HMPREF1078_RS01560		glycosyltransferase family 4 protein	no	0.46
18	HMPREF1078_RS05695		transcriptional repressor	no	0.45
19	HMPREF1078_RS00680		glycoside hydrolase family 97 protein	no	0.45
20	HMPREF1078_RS11680		DUF1735 domain-containing protein	no	0.44

Or look for negative cofitness