Top cofit genes for HMPREF1078_RS07030 from Parabacteroides merdae CL09T00C40

RNA polymerase sigma-70 factor
SEED: RNA polymerase ECF-type sigma factor
KEGG: RNA polymerase sigma-70 factor, ECF subfamily

Rank Hit Name Description Conserved? Cofitness  
1 HMPREF1078_RS17435 UDP-glucose/GDP-mannose dehydrogenase family protein no 0.60
2 HMPREF1078_RS04385 HU family DNA-binding protein no 0.60
3 HMPREF1078_RS12450 carbamoyl-phosphate synthase (glutamine-hydrolyzing) large subunit no 0.60
4 HMPREF1078_RS05610 bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase no 0.57
5 HMPREF1078_RS09795 MarR family transcriptional regulator no 0.56
6 HMPREF1078_RS14395 beta-galactosidase GalB no 0.56
7 HMPREF1078_RS07810 RagB/SusD family nutrient uptake outer membrane protein no 0.54
8 HMPREF1078_RS03560 3'-5' exonuclease no 0.54
9 HMPREF1078_RS06895 ABC transporter ATP-binding protein no 0.54
10 HMPREF1078_RS16055 aminoglycoside phosphotransferase family protein 0.34 0.53
11 HMPREF1078_RS11980 thiamine diphosphokinase no 0.53
12 HMPREF1078_RS11725 N-acetylmuramoyl-L-alanine amidase no 0.53
13 HMPREF1078_RS00195 undecaprenyl-phosphate glucose phosphotransferase no 0.53
14 HMPREF1078_RS06175 Holliday junction branch migration DNA helicase RuvB no 0.53
15 HMPREF1078_RS04015 hypothetical protein no 0.53
16 HMPREF1078_RS11280 DUF6242 domain-containing protein no 0.52
17 HMPREF1078_RS06550 RNA methyltransferase no 0.52
18 HMPREF1078_RS14670 DUF4270 domain-containing protein no 0.52
19 HMPREF1078_RS15765 RNA polymerase sigma factor no 0.52
20 HMPREF1078_RS04655 penicillin-binding protein no 0.51

Or look for negative cofitness