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Cofit
Protein
Homologs
Top cofit genes for HMPREF1078_RS06290 from
Parabacteroides merdae CL09T00C40
hypothetical protein
Rank
Hit
Name
Description
Conserved?
Cofitness
1
HMPREF1078
_RS12625
hybrid sensor histidine kinase/response regulator transcription factor
no
0.58
2
HMPREF1078
_RS00680
glycoside hydrolase family 97 protein
no
0.57
3
HMPREF1078
_RS05990
alanine/glycine:cation symporter family protein
no
0.54
4
HMPREF1078
_RS06900
PLDc N-terminal domain-containing protein
no
0.54
5
HMPREF1078
_RS11680
DUF1735 domain-containing protein
no
0.52
6
HMPREF1078
_RS05205
carbohydrate kinase
no
0.51
7
HMPREF1078
_RS05210
DUF4980 domain-containing protein
no
0.51
8
HMPREF1078
_RS00725
YeiH family protein
no
0.50
9
HMPREF1078
_RS11690
TonB-dependent receptor
no
0.50
10
HMPREF1078
_RS01575
ATP-grasp domain-containing protein
no
0.50
11
HMPREF1078
_RS02095
TonB-dependent receptor
no
0.49
12
HMPREF1078
_RS05200
MFS transporter
no
0.49
13
HMPREF1078
_RS15370
carboxypeptidase-like regulatory domain-containing protein
no
0.49
14
HMPREF1078
_RS08110
ABC transporter permease
no
0.49
15
HMPREF1078
_RS06160
TIGR00341 family protein
no
0.49
16
HMPREF1078
_RS06130
hypothetical protein
no
0.49
17
HMPREF1078
_RS11975
nicotinamide riboside transporter PnuC
no
0.49
18
HMPREF1078
_RS14865
tetratricopeptide repeat protein
no
0.48
19
HMPREF1078
_RS16000
WecB/TagA/CpsF family glycosyltransferase
no
0.48
20
HMPREF1078
_RS01140
hydrogen peroxide-inducible genes activator
no
0.48
Or look for
negative cofitness