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  • Top cofit genes for HMPREF1078_RS06290 from Parabacteroides merdae CL09T00C40

    hypothetical protein

    Rank Hit Name Description Conserved? Cofitness  
    1 HMPREF1078_RS12625 hybrid sensor histidine kinase/response regulator transcription factor no 0.58
    2 HMPREF1078_RS00680 glycoside hydrolase family 97 protein no 0.57
    3 HMPREF1078_RS05990 alanine/glycine:cation symporter family protein no 0.54
    4 HMPREF1078_RS06900 PLDc N-terminal domain-containing protein no 0.54
    5 HMPREF1078_RS11680 DUF1735 domain-containing protein no 0.52
    6 HMPREF1078_RS05205 carbohydrate kinase no 0.51
    7 HMPREF1078_RS05210 DUF4980 domain-containing protein no 0.51
    8 HMPREF1078_RS00725 YeiH family protein no 0.50
    9 HMPREF1078_RS11690 TonB-dependent receptor no 0.50
    10 HMPREF1078_RS01575 ATP-grasp domain-containing protein no 0.50
    11 HMPREF1078_RS02095 TonB-dependent receptor no 0.49
    12 HMPREF1078_RS05200 MFS transporter no 0.49
    13 HMPREF1078_RS15370 carboxypeptidase-like regulatory domain-containing protein no 0.49
    14 HMPREF1078_RS08110 ABC transporter permease no 0.49
    15 HMPREF1078_RS06160 TIGR00341 family protein no 0.49
    16 HMPREF1078_RS06130 hypothetical protein no 0.49
    17 HMPREF1078_RS11975 nicotinamide riboside transporter PnuC no 0.49
    18 HMPREF1078_RS14865 tetratricopeptide repeat protein no 0.48
    19 HMPREF1078_RS16000 WecB/TagA/CpsF family glycosyltransferase no 0.48
    20 HMPREF1078_RS01140 hydrogen peroxide-inducible genes activator no 0.48

    Or look for negative cofitness