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  • Top cofit genes for HMPREF1078_RS06185 from Parabacteroides merdae CL09T00C40

    glycosyltransferase family 87 protein
    SEED: FIG00898546: hypothetical protein

    Rank Hit Name Description Conserved? Cofitness  
    1 HMPREF1078_RS02480 mechanosensitive ion channel no 0.44
    2 HMPREF1078_RS07575 thioredoxin no 0.43
    3 HMPREF1078_RS16875 type I methionyl aminopeptidase no 0.43
    4 HMPREF1078_RS00345 ATP-binding protein no 0.43
    5 HMPREF1078_RS06180 outer membrane beta-barrel protein 0.51 0.43
    6 HMPREF1078_RS05665 RNA polymerase sigma-70 factor no 0.43
    7 HMPREF1078_RS05240 AraC family transcriptional regulator no 0.42
    8 HMPREF1078_RS13615 RNA polymerase sigma factor no 0.42
    9 HMPREF1078_RS14690 MATE family efflux transporter no 0.42
    10 HMPREF1078_RS04510 Gfo/Idh/MocA family oxidoreductase no 0.42
    11 HMPREF1078_RS07605 GNAT family N-acetyltransferase no 0.40
    12 HMPREF1078_RS01310 lactate utilization protein B no 0.40
    13 HMPREF1078_RS13365 nucleotidyltransferase family protein no 0.40
    14 HMPREF1078_RS04360 sigma-70 family RNA polymerase sigma factor no 0.39
    15 HMPREF1078_RS11770 hypothetical protein no 0.38
    16 HMPREF1078_RS15760 NfeD family protein no 0.38
    17 HMPREF1078_RS04695 pyruvate kinase no 0.38
    18 HMPREF1078_RS14945 DUF1282 family protein no 0.37
    19 HMPREF1078_RS07815 M20/M25/M40 family metallo-hydrolase no 0.37
    20 HMPREF1078_RS09875 glycoside hydrolase family 3 C-terminal domain-containing protein no 0.37

    Or look for negative cofitness