Top cofit genes for HMPREF1078_RS04555 from Parabacteroides merdae CL09T00C40

HAMP domain-containing sensor histidine kinase
SEED: Two-component system sensor histidine kinase
KEGG: two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR

Rank	Hit	Name	Description	Conserved?	Cofitness
1	HMPREF1078_RS13995		hypothetical protein	no	0.92
2	HMPREF1078_RS13545		diaminopimelate decarboxylase	no	0.91
3	HMPREF1078_RS15460		DUF3078 domain-containing protein	no	0.89
4	HMPREF1078_RS04325		phosphoribosylformylglycinamidine synthase	no	0.88
5	HMPREF1078_RS10005		TonB-dependent receptor	no	0.88
6	HMPREF1078_RS05545		4-hydroxy-tetrahydrodipicolinate reductase	no	0.87
7	HMPREF1078_RS07205		shikimate kinase	no	0.87
8	HMPREF1078_RS16160		gliding motility lipoprotein GldH	no	0.87
9	HMPREF1078_RS05515		gliding motility protein GldN	no	0.87
10	HMPREF1078_RS06560		two-component regulator propeller domain-containing protein	no	0.86
11	HMPREF1078_RS15335		acetylglutamate kinase	no	0.86
12	HMPREF1078_RS06805		phosphoribosylamine--glycine ligase	no	0.85
13	HMPREF1078_RS11105		type IX secretion system protein PorQ	no	0.85
14	HMPREF1078_RS05620		tetratricopeptide repeat protein	no	0.85
15	HMPREF1078_RS04700		type II 3-dehydroquinate dehydratase	no	0.85
16	HMPREF1078_RS04840		type IX secretion system sortase PorU	no	0.85
17	HMPREF1078_RS07755		outer membrane protein assembly factor BamD	no	0.85
18	HMPREF1078_RS15400		3-phosphoserine/phosphohydroxythreonine transaminase	no	0.85
19	HMPREF1078_RS10580		N-acetyl-gamma-glutamyl-phosphate reductase	no	0.85
20	HMPREF1078_RS06740		DUF4271 domain-containing protein	no	0.84

Or look for negative cofitness