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Cofit
Protein
Homologs
Top cofit genes for HMPREF1078_RS04330 from
Parabacteroides merdae CL09T00C40
porin family protein
Rank
Hit
Name
Description
Conserved?
Cofitness
1
HMPREF1078
_RS00515
OmpA family protein
no
0.74
2
HMPREF1078
_RS14945
DUF1282 family protein
no
0.71
3
HMPREF1078
_RS11075
DUF1573 domain-containing protein
no
0.71
4
HMPREF1078
_RS10105
TolC family protein
no
0.71
5
HMPREF1078
_RS12520
F0F1 ATP synthase subunit alpha
no
0.71
6
HMPREF1078
_RS16130
bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase
no
0.70
7
HMPREF1078
_RS12485
F0F1 ATP synthase subunit beta
no
0.70
8
HMPREF1078
_RS01045
2-succinyl-5-enolpyruvyl-6-hydroxy-3- cyclohexene-1-carboxylic-acid synthase
no
0.69
9
HMPREF1078
_RS12515
F0F1 ATP synthase subunit delta
no
0.69
10
HMPREF1078
_RS15880
tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA
no
0.69
11
HMPREF1078
_RS12505
ATP synthase F0 subunit C
no
0.68
12
HMPREF1078
_RS10095
ABC transporter permease
no
0.68
13
HMPREF1078
_RS03090
helix-turn-helix transcriptional regulator
no
0.68
14
HMPREF1078
_RS04405
M23 family metallopeptidase
no
0.67
15
HMPREF1078
_RS12525
F0F1 ATP synthase subunit gamma
no
0.67
16
HMPREF1078
_RS13140
zinc metallopeptidase
no
0.67
17
HMPREF1078
_RS07555
phosphoethanolamine transferase
no
0.67
18
HMPREF1078
_RS04130
hypothetical protein
no
0.67
19
HMPREF1078
_RS00560
GtrA family protein
no
0.67
20
HMPREF1078
_RS04120
hypothetical protein
no
0.66
Or look for
negative cofitness