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Cofit
Protein
Homologs
Top cofit genes for HMPREF1078_RS04255 from
Parabacteroides merdae CL09T00C40
porin
SEED: FIG00897404: hypothetical protein
Rank
Hit
Name
Description
Conserved?
Cofitness
1
HMPREF1078
_RS04180
prolyl oligopeptidase family serine peptidase
no
0.39
2
HMPREF1078
_RS14255
TonB-dependent receptor
no
0.39
3
HMPREF1078
_RS05955
PaaI family thioesterase
no
0.38
4
HMPREF1078
_RS01330
TIGR04076 family protein
no
0.37
5
HMPREF1078
_RS19980
hypothetical protein
no
0.36
6
HMPREF1078
_RS16600
AraC family transcriptional regulator
no
0.36
7
HMPREF1078
_RS02370
transglycosylase SLT domain-containing protein
no
0.35
8
HMPREF1078
_RS06450
L-fucose/L-arabinose isomerase family protein
no
0.35
9
HMPREF1078
_RS01255
PL29 family lyase N-terminal domain-containing protein
no
0.34
10
HMPREF1078
_RS03850
GDP-L-fucose synthase
no
0.34
11
HMPREF1078
_RS07495
hypothetical protein
no
0.33
12
HMPREF1078
_RS13260
ATP-binding protein
no
0.33
13
HMPREF1078
_RS14260
RagB/SusD family nutrient uptake outer membrane protein
no
0.33
14
HMPREF1078
_RS04600
carbon starvation protein A
no
0.33
15
HMPREF1078
_RS14050
DUF1080 domain-containing protein
no
0.32
16
HMPREF1078
_RS05785
glycoside hydrolase family 31 protein
no
0.32
17
HMPREF1078
_RS01285
GNAT family N-acetyltransferase
no
0.31
18
HMPREF1078
_RS10040
DsbA family protein
no
0.31
19
HMPREF1078
_RS04185
DUF6383 domain-containing protein
no
0.31
20
HMPREF1078
_RS06480
efflux RND transporter permease subunit
no
0.31
Or look for
negative cofitness