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  • Top cofit genes for HMPREF1078_RS04060 from Parabacteroides merdae CL09T00C40

    hypothetical protein

    Rank Hit Name Description Conserved? Cofitness  
    1 HMPREF1078_RS04500 cytochrome ubiquinol oxidase subunit I no 0.77
    2 HMPREF1078_RS16225 DUF3276 family protein no 0.74
    3 HMPREF1078_RS00100 thioredoxin-dependent thiol peroxidase no 0.72
    4 HMPREF1078_RS13640 SDR family oxidoreductase no 0.72
    5 HMPREF1078_RS14500 type III pantothenate kinase no 0.70
    6 HMPREF1078_RS13320 NADP-specific glutamate dehydrogenase no 0.70
    7 HMPREF1078_RS13635 mannonate dehydratase no 0.70
    8 HMPREF1078_RS00540 hypothetical protein no 0.69
    9 HMPREF1078_RS12670 BF3164 family lipoprotein no 0.69
    10 HMPREF1078_RS00305 family 20 glycosylhydrolase no 0.69
    11 HMPREF1078_RS12675 NVEALA domain-containing protein no 0.68
    12 HMPREF1078_RS08455 carboxylase no 0.68
    13 HMPREF1078_RS10785 lysophospholipid acyltransferase family protein no 0.68
    14 HMPREF1078_RS01110 DNA topoisomerase 3 no 0.68
    15 HMPREF1078_RS05615 glucuronate isomerase no 0.68
    16 HMPREF1078_RS04440 AAA family ATPase no 0.68
    17 HMPREF1078_RS00105 radical SAM protein no 0.68
    18 HMPREF1078_RS03160 type I restriction endonuclease subunit R no 0.67
    19 HMPREF1078_RS13045 porin family protein no 0.67
    20 HMPREF1078_RS13325 PEP/pyruvate-binding domain-containing protein no 0.67

    Or look for negative cofitness