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Cofit
Protein
Homologs
Top cofit genes for HMPREF1078_RS03725 from
Parabacteroides merdae CL09T00C40
flavodoxin family protein
Rank
Hit
Name
Description
Conserved?
Cofitness
1
HMPREF1078
_RS19825
hypothetical protein
no
0.47
2
HMPREF1078
_RS12715
oxaloacetate decarboxylase
no
0.46
3
HMPREF1078
_RS17640
GH92 family glycosyl hydrolase
no
0.43
4
HMPREF1078
_RS16775
metallophosphoesterase family protein
no
0.42
5
HMPREF1078
_RS00155
FecR domain-containing protein
no
0.41
6
HMPREF1078
_RS10130
sugar O-acetyltransferase
no
0.41
7
HMPREF1078
_RS16745
META domain-containing protein
no
0.40
8
HMPREF1078
_RS13895
nitroreductase family protein
no
0.39
9
HMPREF1078
_RS05765
TonB-dependent receptor
no
0.39
10
HMPREF1078
_RS16550
hypothetical protein
no
0.38
11
HMPREF1078
_RS04935
iron-sulfur cluster assembly protein
no
0.37
12
HMPREF1078
_RS11950
CvpA family protein
no
0.37
13
HMPREF1078
_RS03700
sigma-54 dependent transcriptional regulator
no
0.37
14
HMPREF1078
_RS18115
glycosyltransferase family 4 protein
no
0.36
15
HMPREF1078
_RS10405
DUF695 domain-containing protein
no
0.36
16
HMPREF1078
_RS01765
L-rhamnose/proton symporter RhaT
no
0.36
17
HMPREF1078
_RS10985
MBL fold metallo-hydrolase
no
0.35
18
HMPREF1078
_RS01310
lactate utilization protein B
no
0.35
19
HMPREF1078
_RS20060
hypothetical protein
no
0.34
20
HMPREF1078
_RS18600
helix-turn-helix domain-containing protein
no
0.34
Or look for
negative cofitness