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Cofit
Protein
Homologs
Top cofit genes for HMPREF1078_RS03355 from
Parabacteroides merdae CL09T00C40
hypothetical protein
Rank
Hit
Name
Description
Conserved?
Cofitness
1
HMPREF1078
_RS02030
malate dehydrogenase
no
0.49
2
HMPREF1078
_RS05470
efflux RND transporter permease subunit
no
0.48
3
HMPREF1078
_RS09515
response regulator transcription factor
no
0.47
4
HMPREF1078
_RS13630
M23 family metallopeptidase
no
0.46
5
HMPREF1078
_RS16250
tRNA-Gln
no
0.46
6
HMPREF1078
_RS04085
TonB-dependent receptor
no
0.46
7
HMPREF1078
_RS03380
3'-5' exonuclease
no
0.46
8
HMPREF1078
_RS11205
uracil-DNA glycosylase
no
0.46
9
HMPREF1078
_RS11655
FprA family A-type flavoprotein
no
0.45
10
HMPREF1078
_RS00525
GNAT family N-acetyltransferase
no
0.45
11
HMPREF1078
_RS03160
type I restriction endonuclease subunit R
no
0.44
12
HMPREF1078
_RS06535
helix-hairpin-helix domain-containing protein
no
0.44
13
HMPREF1078
_RS13615
RNA polymerase sigma factor
no
0.44
14
HMPREF1078
_RS03760
antibiotic biosynthesis monooxygenase
no
0.44
15
HMPREF1078
_RS08705
aldose epimerase family protein
no
0.44
16
HMPREF1078
_RS03385
hypothetical protein
no
0.43
17
HMPREF1078
_RS01335
porin family protein
no
0.43
18
HMPREF1078
_RS15185
DUF4974 domain-containing protein
no
0.43
19
HMPREF1078
_RS07200
viroplasmin family protein
no
0.43
20
HMPREF1078
_RS09375
hypothetical protein
no
0.43
Or look for
negative cofitness