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  • Top cofit genes for HMPREF1078_RS03355 from Parabacteroides merdae CL09T00C40

    hypothetical protein

    Rank Hit Name Description Conserved? Cofitness  
    1 HMPREF1078_RS02030 malate dehydrogenase no 0.49
    2 HMPREF1078_RS05470 efflux RND transporter permease subunit no 0.48
    3 HMPREF1078_RS09515 response regulator transcription factor no 0.47
    4 HMPREF1078_RS13630 M23 family metallopeptidase no 0.46
    5 HMPREF1078_RS16250 tRNA-Gln no 0.46
    6 HMPREF1078_RS04085 TonB-dependent receptor no 0.46
    7 HMPREF1078_RS03380 3'-5' exonuclease no 0.46
    8 HMPREF1078_RS11205 uracil-DNA glycosylase no 0.46
    9 HMPREF1078_RS11655 FprA family A-type flavoprotein no 0.45
    10 HMPREF1078_RS00525 GNAT family N-acetyltransferase no 0.45
    11 HMPREF1078_RS03160 type I restriction endonuclease subunit R no 0.44
    12 HMPREF1078_RS06535 helix-hairpin-helix domain-containing protein no 0.44
    13 HMPREF1078_RS13615 RNA polymerase sigma factor no 0.44
    14 HMPREF1078_RS03760 antibiotic biosynthesis monooxygenase no 0.44
    15 HMPREF1078_RS08705 aldose epimerase family protein no 0.44
    16 HMPREF1078_RS03385 hypothetical protein no 0.43
    17 HMPREF1078_RS01335 porin family protein no 0.43
    18 HMPREF1078_RS15185 DUF4974 domain-containing protein no 0.43
    19 HMPREF1078_RS07200 viroplasmin family protein no 0.43
    20 HMPREF1078_RS09375 hypothetical protein no 0.43

    Or look for negative cofitness