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  • Top cofit genes for HMPREF1078_RS03345 from Parabacteroides merdae CL09T00C40

    hypothetical protein
    SEED: FIG00405319: hypothetical protein

    Rank Hit Name Description Conserved? Cofitness  
    1 HMPREF1078_RS00870 GAF domain-containing protein no 0.41
    2 HMPREF1078_RS03190 restriction endonuclease subunit S no 0.39
    3 HMPREF1078_RS11390 TonB-dependent receptor no 0.37
    4 HMPREF1078_RS07140 nucleotidyltransferase domain-containing protein no 0.35
    5 HMPREF1078_RS08635 glucose-6-phosphate dehydrogenase no 0.35
    6 HMPREF1078_RS11885 sigma-70 family RNA polymerase sigma factor no 0.33
    7 HMPREF1078_RS08500 DUF4435 domain-containing protein no 0.33
    8 HMPREF1078_RS05090 AAA family ATPase no 0.33
    9 HMPREF1078_RS10085 sugar phosphate isomerase/epimerase no 0.33
    10 HMPREF1078_RS11025 glycosyltransferase family protein no 0.32
    11 HMPREF1078_RS11875 FecR domain-containing protein no 0.32
    12 HMPREF1078_RS10680 acyloxyacyl hydrolase no 0.32
    13 HMPREF1078_RS14315 M64 family metallopeptidase no 0.32
    14 HMPREF1078_RS16620 hypothetical protein no 0.32
    15 HMPREF1078_RS09030 TraG family conjugative transposon ATPase no 0.32
    16 HMPREF1078_RS09685 DEAD/DEAH box helicase no 0.32
    17 HMPREF1078_RS06370 fimbrillin family protein no 0.32
    18 HMPREF1078_RS02890 PcfK-like family protein no 0.31
    19 HMPREF1078_RS09585 FAD-dependent oxidoreductase no 0.31
    20 HMPREF1078_RS03325 DUF5045 domain-containing protein no 0.31

    Or look for negative cofitness