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Cofit
Protein
Homologs
Top cofit genes for HMPREF1078_RS03115 from
Parabacteroides merdae CL09T00C40
hypothetical protein
Rank
Hit
Name
Description
Conserved?
Cofitness
1
HMPREF1078
_RS03110
ATP-binding protein
no
0.93
2
HMPREF1078
_RS05905
Na/Pi cotransporter family protein
no
0.90
3
HMPREF1078
_RS13800
DEAD/DEAH box helicase family protein
no
0.88
4
HMPREF1078
_RS13785
DUF87 domain-containing protein
no
0.88
5
HMPREF1078
_RS13790
AAA family ATPase
no
0.88
6
HMPREF1078
_RS08015
helix-turn-helix domain-containing protein
no
0.88
7
HMPREF1078
_RS07665
NADP-dependent malic enzyme
no
0.88
8
HMPREF1078
_RS13780
HAMP domain-containing histidine kinase
no
0.86
9
HMPREF1078
_RS13775
response regulator
no
0.86
10
HMPREF1078
_RS02385
recombinase family protein
no
0.86
11
HMPREF1078
_RS13805
site-specific DNA-methyltransferase
no
0.85
12
HMPREF1078
_RS04160
Mur ligase family protein
no
0.82
13
HMPREF1078
_RS12260
prolyl oligopeptidase family serine peptidase
no
0.80
14
HMPREF1078
_RS13090
C1 family peptidase
no
0.79
15
HMPREF1078
_RS13810
helix-turn-helix transcriptional regulator
no
0.78
16
HMPREF1078
_RS17200
glycoside hydrolase family 95 protein
no
0.78
17
HMPREF1078
_RS12835
S41 family peptidase
no
0.78
18
HMPREF1078
_RS14500
type III pantothenate kinase
no
0.78
19
HMPREF1078
_RS13795
hypothetical protein
no
0.76
20
HMPREF1078
_RS09890
cation:proton antiporter
no
0.75
Or look for
negative cofitness