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Cofit
Protein
Homologs
Top cofit genes for HMPREF1078_RS03060 from
Parabacteroides merdae CL09T00C40
hypothetical protein
Rank
Hit
Name
Description
Conserved?
Cofitness
1
HMPREF1078
_RS12845
RagB/SusD family nutrient uptake outer membrane protein
no
0.61
2
HMPREF1078
_RS00520
GNAT family N-acetyltransferase
no
0.59
3
HMPREF1078
_RS00420
HIT family protein
no
0.58
4
HMPREF1078
_RS00685
MBL fold metallo-hydrolase
no
0.58
5
HMPREF1078
_RS01050
glycoside hydrolase family 31 protein
no
0.57
6
HMPREF1078
_RS03860
WecB/TagA/CpsF family glycosyltransferase
no
0.57
7
HMPREF1078
_RS12240
NAD(+) diphosphatase
no
0.56
8
HMPREF1078
_RS13260
ATP-binding protein
no
0.56
9
HMPREF1078
_RS12850
TonB-dependent receptor
no
0.55
10
HMPREF1078
_RS09930
exonuclease SbcCD subunit D
no
0.55
11
HMPREF1078
_RS05425
TonB-dependent receptor
no
0.54
12
HMPREF1078
_RS08250
alpha/beta fold hydrolase
no
0.53
13
HMPREF1078
_RS15540
RagB/SusD family nutrient uptake outer membrane protein
no
0.53
14
HMPREF1078
_RS05270
TrpB-like pyridoxal phosphate-dependent enzyme
no
0.53
15
HMPREF1078
_RS15565
N-acetylglucosamine-6-phosphate deacetylase
no
0.53
16
HMPREF1078
_RS15625
toxin-antitoxin system YwqK family antitoxin
no
0.52
17
HMPREF1078
_RS12860
RNA polymerase sigma-70 factor
no
0.52
18
HMPREF1078
_RS17360
D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase
no
0.51
19
HMPREF1078
_RS16365
GH92 family glycosyl hydrolase
no
0.51
20
HMPREF1078
_RS07675
FKBP-type peptidyl-prolyl cis-trans isomerase
no
0.51
Or look for
negative cofitness