• Private Fitness
  • Home
  • Find Gene
  • BLAST
  • Experiments
  • Organisms
  • Help
  • Gene
  • Fitness
  • Nearby
  • Cofit
  • Protein
  • Homologs
  • Top cofit genes for HMPREF1078_RS03060 from Parabacteroides merdae CL09T00C40

    hypothetical protein

    Rank Hit Name Description Conserved? Cofitness  
    1 HMPREF1078_RS12845 RagB/SusD family nutrient uptake outer membrane protein no 0.61
    2 HMPREF1078_RS00520 GNAT family N-acetyltransferase no 0.59
    3 HMPREF1078_RS00420 HIT family protein no 0.58
    4 HMPREF1078_RS00685 MBL fold metallo-hydrolase no 0.58
    5 HMPREF1078_RS01050 glycoside hydrolase family 31 protein no 0.57
    6 HMPREF1078_RS03860 WecB/TagA/CpsF family glycosyltransferase no 0.57
    7 HMPREF1078_RS12240 NAD(+) diphosphatase no 0.56
    8 HMPREF1078_RS13260 ATP-binding protein no 0.56
    9 HMPREF1078_RS12850 TonB-dependent receptor no 0.55
    10 HMPREF1078_RS09930 exonuclease SbcCD subunit D no 0.55
    11 HMPREF1078_RS05425 TonB-dependent receptor no 0.54
    12 HMPREF1078_RS08250 alpha/beta fold hydrolase no 0.53
    13 HMPREF1078_RS15540 RagB/SusD family nutrient uptake outer membrane protein no 0.53
    14 HMPREF1078_RS05270 TrpB-like pyridoxal phosphate-dependent enzyme no 0.53
    15 HMPREF1078_RS15565 N-acetylglucosamine-6-phosphate deacetylase no 0.53
    16 HMPREF1078_RS15625 toxin-antitoxin system YwqK family antitoxin no 0.52
    17 HMPREF1078_RS12860 RNA polymerase sigma-70 factor no 0.52
    18 HMPREF1078_RS17360 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase no 0.51
    19 HMPREF1078_RS16365 GH92 family glycosyl hydrolase no 0.51
    20 HMPREF1078_RS07675 FKBP-type peptidyl-prolyl cis-trans isomerase no 0.51

    Or look for negative cofitness