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  • Top cofit genes for HMPREF1078_RS02430 from Parabacteroides merdae CL09T00C40

    lipocalin-like domain-containing protein

    Rank Hit Name Description Conserved? Cofitness  
    1 HMPREF1078_RS10780 capsule assembly Wzi family protein no 0.99
    2 HMPREF1078_RS01870 phosphatase PAP2 family protein no 0.95
    3 HMPREF1078_RS10475 glycosyltransferase family 4 protein no 0.95
    4 HMPREF1078_RS10470 glycosyltransferase no 0.95
    5 HMPREF1078_RS10465 hypothetical protein no 0.95
    6 HMPREF1078_RS08505 glycosyltransferase family 39 protein no 0.95
    7 HMPREF1078_RS00195 undecaprenyl-phosphate glucose phosphotransferase no 0.94
    8 HMPREF1078_RS13635 mannonate dehydratase no 0.93
    9 HMPREF1078_RS03560 3'-5' exonuclease no 0.91
    10 HMPREF1078_RS11980 thiamine diphosphokinase no 0.90
    11 HMPREF1078_RS13315 crossover junction endodeoxyribonuclease RuvC no 0.90
    12 HMPREF1078_RS11280 DUF6242 domain-containing protein no 0.90
    13 HMPREF1078_RS00070 glycosyltransferase no 0.90
    14 HMPREF1078_RS00095 recombinase RecA no 0.89
    15 HMPREF1078_RS08660 glycosyltransferase family 2 protein no 0.89
    16 HMPREF1078_RS13640 SDR family oxidoreductase no 0.88
    17 HMPREF1078_RS18905 diacylglycerol kinase family protein no 0.87
    18 HMPREF1078_RS10885 tyrosine recombinase XerC no 0.87
    19 HMPREF1078_RS04705 site-specific tyrosine recombinase XerD no 0.87
    20 HMPREF1078_RS13735 hypothetical protein no 0.86

    Or look for negative cofitness