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Cofit
Protein
Homologs
Top cofit genes for HMPREF1078_RS01500 from
Parabacteroides merdae CL09T00C40
DUF4407 domain-containing protein
Rank
Hit
Name
Description
Conserved?
Cofitness
1
HMPREF1078
_RS17480
glycosyltransferase
no
0.80
2
HMPREF1078
_RS17495
DegT/DnrJ/EryC1/StrS family aminotransferase
no
0.80
3
HMPREF1078
_RS17490
FdtA/QdtA family cupin domain-containing protein
no
0.79
4
HMPREF1078
_RS17485
glycosyl transferase
no
0.78
5
HMPREF1078
_RS17475
nucleotide sugar dehydrogenase
no
0.75
6
HMPREF1078
_RS15765
RNA polymerase sigma factor
no
0.75
7
HMPREF1078
_RS00925
UpxY family transcription antiterminator
no
0.75
8
HMPREF1078
_RS14945
DUF1282 family protein
no
0.74
9
HMPREF1078
_RS17055
trigger factor
no
0.74
10
HMPREF1078
_RS17455
UDP-N-acetylglucosamine 2-epimerase (non-hydrolyzing)
no
0.73
11
HMPREF1078
_RS20110
hypothetical protein
no
0.72
12
HMPREF1078
_RS06805
phosphoribosylamine--glycine ligase
no
0.72
13
HMPREF1078
_RS17080
ATP-binding cassette domain-containing protein
no
0.71
14
HMPREF1078
_RS05620
tetratricopeptide repeat protein
no
0.71
15
HMPREF1078
_RS08705
aldose epimerase family protein
no
0.71
16
HMPREF1078
_RS11685
RagB/SusD family nutrient uptake outer membrane protein
no
0.70
17
HMPREF1078
_RS17435
UDP-glucose/GDP-mannose dehydrogenase family protein
no
0.70
18
HMPREF1078
_RS05890
SMP-30/gluconolactonase/LRE family protein
no
0.70
19
HMPREF1078
_RS17460
glycosyltransferase family 4 protein
no
0.70
20
HMPREF1078
_RS16340
SusC/RagA family TonB-linked outer membrane protein
no
0.70
Or look for
negative cofitness