Top cofit genes for HMPREF1078_RS01355 from Parabacteroides merdae CL09T00C40

efflux transporter outer membrane subunit
SEED: Outer membrane protein oprM

Rank	Hit	Name	Description	Conserved?	Cofitness
1	HMPREF1078_RS01360		efflux RND transporter permease subunit	0.40	0.76
2	HMPREF1078_RS01435		hypothetical protein	no	0.75
3	HMPREF1078_RS01365		efflux RND transporter periplasmic adaptor subunit	0.39	0.74
4	HMPREF1078_RS05605		sugar kinase	no	0.72
5	HMPREF1078_RS12820		Na+/H+ antiporter NhaC	no	0.71
6	HMPREF1078_RS16055		aminoglycoside phosphotransferase family protein	no	0.70
7	HMPREF1078_RS05610		bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase	no	0.70
8	HMPREF1078_RS07805		TonB-dependent receptor	no	0.69
9	HMPREF1078_RS05265		DcaP family trimeric outer membrane transporter	no	0.68
10	HMPREF1078_RS06210		dihydrodipicolinate synthase family protein	no	0.67
11	HMPREF1078_RS04525		hypothetical protein	no	0.67
12	HMPREF1078_RS00010		multidrug efflux RND transporter permease subunit	no	0.67
13	HMPREF1078_RS17045		ATP-dependent Clp protease ATP-binding subunit ClpX	no	0.67
14	HMPREF1078_RS00900		efflux RND transporter permease subunit	no	0.67
15	HMPREF1078_RS03900		O-antigen ligase family protein	no	0.66
16	HMPREF1078_RS10785		lysophospholipid acyltransferase family protein	no	0.66
17	HMPREF1078_RS02265		hypothetical protein	no	0.66
18	HMPREF1078_RS00980		HU family DNA-binding protein	no	0.65
19	HMPREF1078_RS06895		ABC transporter ATP-binding protein	0.70	0.65
20	HMPREF1078_RS07795		SusC/RagA family TonB-linked outer membrane protein	no	0.64

Or look for negative cofitness