Top cofit genes for HMPREF1078_RS00720 from Parabacteroides merdae CL09T00C40

LysR family transcriptional regulator
SEED: LysR family transcriptional regulator YeiE

Rank	Hit	Name	Description	Conserved?	Cofitness
1	HMPREF1078_RS06735		Gfo/Idh/MocA family oxidoreductase	no	0.57
2	HMPREF1078_RS03935		acyltransferase	no	0.50
3	HMPREF1078_RS09275		DUF3408 domain-containing protein	no	0.49
4	HMPREF1078_RS01675		2-hydroxyacid dehydrogenase	no	0.49
5	HMPREF1078_RS03600		hypothetical protein	no	0.48
6	HMPREF1078_RS08400		hypothetical protein	no	0.48
7	HMPREF1078_RS14635		5-formyltetrahydrofolate cyclo-ligase	0.37	0.47
8	HMPREF1078_RS13415		LuxR C-terminal-related transcriptional regulator	0.62	0.45
9	HMPREF1078_RS10330		M13 family metallopeptidase	0.46	0.45
10	HMPREF1078_RS00005		efflux RND transporter periplasmic adaptor subunit	0.75	0.43
11	HMPREF1078_RS00295		50S ribosomal protein L35	no	0.42
12	HMPREF1078_RS14390		anaerobic C4-dicarboxylate transporter	no	0.42
13	HMPREF1078_RS03590		MBOAT family protein	no	0.42
14	HMPREF1078_RS17665		PepSY-like domain-containing protein	no	0.41
15	HMPREF1078_RS02875		recombination protein NinG	no	0.40
16	HMPREF1078_RS11050		aldose epimerase family protein	0.57	0.40
17	HMPREF1078_RS03975		polysaccharide biosynthesis/export family protein	no	0.40
18	HMPREF1078_RS04885		magnesium transporter	0.52	0.40
19	HMPREF1078_RS02210		Na+/H+ antiporter NhaC family protein	0.36	0.39
20	HMPREF1078_RS02885		DUF1566 domain-containing protein	no	0.38

Or look for negative cofitness