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Cofit
Protein
Homologs
Top cofit genes for HMPREF1058_RS11985 from
Phocaeicola vulgatus CL09T03C04
thioredoxin
SEED: Thioredoxin
Rank
Hit
Name
Description
Conserved?
Cofitness
1
HMPREF1058
_RS15005
hypothetical protein
no
0.39
2
HMPREF1058
_RS16125
nucleotide sugar dehydrogenase
no
0.38
3
HMPREF1058
_RS15010
dicarboxylate/amino acid:cation symporter
no
0.38
4
HMPREF1058
_RS06305
LruC domain-containing protein
no
0.36
5
HMPREF1058
_RS11000
hypothetical protein
no
0.36
6
HMPREF1058
_RS09740
glycosyltransferase family 4 protein
no
0.32
7
HMPREF1058
_RS12815
sodium-dependent transporter
no
0.32
8
HMPREF1058
_RS18020
dicarboxylate/amino acid:cation symporter
no
0.32
9
HMPREF1058
_RS00245
DUF5110 domain-containing protein
no
0.30
10
HMPREF1058
_RS13000
hypothetical protein
no
0.30
11
HMPREF1058
_RS18625
response regulator transcription factor
no
0.30
12
HMPREF1058
_RS06345
Fe-S cluster domain-containing protein
no
0.30
13
HMPREF1058
_RS14270
Lrp/AsnC ligand binding domain-containing protein
no
0.30
14
HMPREF1058
_RS03410
hypothetical protein
no
0.29
15
HMPREF1058
_RS15690
ATP-binding cassette domain-containing protein
no
0.29
16
HMPREF1058
_RS16670
site-specific integrase
no
0.29
17
HMPREF1058
_RS16085
hypothetical protein
no
0.29
18
HMPREF1058
_RS15795
TolC family protein
no
0.29
19
HMPREF1058
_RS04905
hypothetical protein
no
0.28
20
HMPREF1058
_RS17600
hypothetical protein
no
0.28
Or look for
negative cofitness