Top cofit genes for HMPREF1058_RS08615 from Phocaeicola vulgatus CL09T03C04

RluA family pseudouridine synthase
SEED: Ribosomal large subunit pseudouridine synthase D (EC 4.2.1.70)
KEGG: ribosomal large subunit pseudouridine synthase D

Rank	Hit	Name	Description	Conserved?	Cofitness
1	HMPREF1058_RS16775		tRNA pseudouridine(38-40) synthase TruA	0.96	0.84
2	HMPREF1058_RS10945		tRNA dihydrouridine synthase DusB	0.76	0.83
3	HMPREF1058_RS10275		RNA-splicing ligase RtcB	no	0.83
4	HMPREF1058_RS00205		cation:proton antiporter	no	0.83
5	HMPREF1058_RS08995		GH92 family glycosyl hydrolase	0.59	0.82
6	HMPREF1058_RS18235		3'-5' exonuclease	no	0.82
7	HMPREF1058_RS10710		DUF3108 domain-containing protein	0.47	0.81
8	HMPREF1058_RS09455		aminopeptidase P family protein	0.56	0.79
9	HMPREF1058_RS11315		tRNA pseudouridine(55) synthase TruB	0.95	0.79
10	HMPREF1058_RS06085		hypothetical protein	no	0.78
11	HMPREF1058_RS06380		copper homeostasis protein CutC	no	0.78
12	HMPREF1058_RS10910		glycosyltransferase family 39 protein	0.49	0.78
13	HMPREF1058_RS10490		rhomboid family intramembrane serine protease	no	0.78
14	HMPREF1058_RS18815		AMP-binding protein	no	0.77
15	HMPREF1058_RS09990		5'-methylthioadenosine/adenosylhomocysteine nucleosidase	no	0.77
16	HMPREF1058_RS14650		efflux RND transporter periplasmic adaptor subunit	no	0.77
17	HMPREF1058_RS14755		hypothetical protein	no	0.77
18	HMPREF1058_RS10460		NAD-dependent epimerase/dehydratase family protein	no	0.77
19	HMPREF1058_RS17235		glycoside hydrolase family 88 protein	no	0.77
20	HMPREF1058_RS14745		ABC transporter substrate-binding protein	0.67	0.77

Or look for negative cofitness