Top cofit genes for HMPREF1058_RS06665 from Phocaeicola vulgatus CL09T03C04

response regulator transcription factor
SEED: putative two-component system response regulator

Rank	Hit	Name	Description	Conserved?	Cofitness
1	HMPREF1058_RS17475		TonB-dependent receptor	no	0.43
2	HMPREF1058_RS10850		glycosyltransferase family 2 protein	no	0.42
3	HMPREF1058_RS07695		DUF4827 domain-containing protein	no	0.41
4	HMPREF1058_RS09685		tetratricopeptide repeat protein	no	0.40
5	HMPREF1058_RS13910		nucleoside deaminase	no	0.40
6	HMPREF1058_RS16490		sodium ion-translocating decarboxylase subunit beta	no	0.39
7	HMPREF1058_RS09485		PDZ domain-containing protein	no	0.39
8	HMPREF1058_RS10855		glycosyltransferase family 2 protein	no	0.39
9	HMPREF1058_RS14030		DUF3822 family protein	no	0.38
10	HMPREF1058_RS13560		beta-glycosidase	no	0.38
11	HMPREF1058_RS18650		M28 family peptidase	no	0.38
12	HMPREF1058_RS16790		TlpA family protein disulfide reductase	no	0.38
13	HMPREF1058_RS05510		hypothetical protein	no	0.38
14	HMPREF1058_RS05475		lactonase family protein	no	0.38
15	HMPREF1058_RS00270		L-rhamnose mutarotase	no	0.37
16	HMPREF1058_RS17090		hypothetical protein	no	0.37
17	HMPREF1058_RS05630		RNA polymerase sigma-70 factor	no	0.37
18	HMPREF1058_RS13470		glycoside hydrolase family 88 protein	no	0.37
19	HMPREF1058_RS10160		hypothetical protein	no	0.37
20	HMPREF1058_RS05505		AAA family ATPase	no	0.37

Or look for negative cofitness