Top cofit genes for HMPREF1058_RS05960 from Phocaeicola vulgatus CL09T03C04

YjbQ family protein
SEED: FIG004064: hypothetical protein

Rank	Hit	Name	Description	Conserved?	Cofitness
1	HMPREF1058_RS04555		YqaJ viral recombinase family protein	no	0.39
2	HMPREF1058_RS05465		DNA-binding protein	no	0.39
3	HMPREF1058_RS08410		RagB/SusD family nutrient uptake outer membrane protein	no	0.35
4	HMPREF1058_RS11850		DUF3874 domain-containing protein	no	0.35
5	HMPREF1058_RS11155		PD-(D/E)XK nuclease domain-containing protein	no	0.34
6	HMPREF1058_RS0119595		hypothetical protein	no	0.33
7	HMPREF1058_RS03690		helix-turn-helix transcriptional regulator	no	0.33
8	HMPREF1058_RS20715		hypothetical protein	no	0.32
9	HMPREF1058_RS15525		hypothetical protein	no	0.32
10	HMPREF1058_RS08895		right-handed parallel beta-helix repeat-containing protein	no	0.32
11	HMPREF1058_RS00270		L-rhamnose mutarotase	no	0.31
12	HMPREF1058_RS11015		hypothetical protein	no	0.31
13	HMPREF1058_RS16800		RagB/SusD family nutrient uptake outer membrane protein	no	0.31
14	HMPREF1058_RS05320		restriction endonuclease	no	0.31
15	HMPREF1058_RS05970		bifunctional proline dehydrogenase/L-glutamate gamma-semialdehyde dehydrogenase	no	0.30
16	HMPREF1058_RS05475		lactonase family protein	no	0.30
17	HMPREF1058_RS05530		site-specific DNA-methyltransferase	no	0.30
18	HMPREF1058_RS05900		autotransporter outer membrane beta-barrel domain-containing protein	no	0.29
19	HMPREF1058_RS06420		type II toxin-antitoxin system HicA family toxin	no	0.29
20	HMPREF1058_RS16565		TlpA family protein disulfide reductase	no	0.29

Or look for negative cofitness