Top cofit genes for HMPREF1058_RS03715 from Phocaeicola vulgatus CL09T03C04

RluA family pseudouridine synthase
SEED: RNA pseudouridylate synthase BT0642
KEGG: ribosomal large subunit pseudouridine synthase D

Rank	Hit	Name	Description	Conserved?	Cofitness
1	HMPREF1058_RS20240		DUF4422 domain-containing protein	no	0.44
2	HMPREF1058_RS11555		spore maturation protein	no	0.42
3	HMPREF1058_RS12315		glycoside hydrolase family 97 protein	no	0.42
4	HMPREF1058_RS11685		DNA-protecting protein DprA	no	0.42
5	HMPREF1058_RS18815		AMP-binding protein	no	0.41
6	HMPREF1058_RS10460		NAD-dependent epimerase/dehydratase family protein	no	0.41
7	HMPREF1058_RS14755		hypothetical protein	no	0.41
8	HMPREF1058_RS10965		cation transporter	no	0.41
9	HMPREF1058_RS06380		copper homeostasis protein CutC	no	0.40
10	HMPREF1058_RS08995		GH92 family glycosyl hydrolase	0.27	0.40
11	HMPREF1058_RS13595		phosphotransferase	no	0.39
12	HMPREF1058_RS05095		hypothetical protein	no	0.39
13	HMPREF1058_RS09990		5'-methylthioadenosine/adenosylhomocysteine nucleosidase	no	0.39
14	HMPREF1058_RS04715		PUR family DNA/RNA-binding protein	no	0.39
15	HMPREF1058_RS18425		ABC-F family ATP-binding cassette domain-containing protein	0.30	0.39
16	HMPREF1058_RS07295		AGE family epimerase/isomerase	no	0.39
17	HMPREF1058_RS07970		chromate transporter	no	0.39
18	HMPREF1058_RS08250		malate dehydrogenase	no	0.39
19	HMPREF1058_RS14655		CusA/CzcA family heavy metal efflux RND transporter	no	0.38
20	HMPREF1058_RS14745		ABC transporter substrate-binding protein	no	0.38

Or look for negative cofitness