Top cofit genes for HMPREF1058_RS03355 from Phocaeicola vulgatus CL09T03C04

efflux RND transporter periplasmic adaptor subunit
SEED: ABC transporter permease
KEGG: HlyD family secretion protein

Rank	Hit	Name	Description	Conserved?	Cofitness
1	HMPREF1058_RS10945		tRNA dihydrouridine synthase DusB	0.53	0.40
2	HMPREF1058_RS02640		CRISPR-associated endonuclease Cas2	no	0.40
3	HMPREF1058_RS18235		3'-5' exonuclease	no	0.39
4	HMPREF1058_RS15825		glycosyltransferase	no	0.39
5	HMPREF1058_RS16610		hypothetical protein	no	0.38
6	HMPREF1058_RS09180		hypothetical protein	no	0.38
7	HMPREF1058_RS10915		alkaline phosphatase family protein	no	0.38
8	HMPREF1058_RS18220		23S rRNA (guanosine(2251)-2'-O)-methyltransferase RlmB	no	0.38
9	HMPREF1058_RS07675		elongation factor G	no	0.38
10	HMPREF1058_RS16775		tRNA pseudouridine(38-40) synthase TruA	no	0.37
11	HMPREF1058_RS03915		hypothetical protein	no	0.37
12	HMPREF1058_RS10835		UDP-galactopyranose mutase	0.41	0.37
13	HMPREF1058_RS02710		transketolase	no	0.37
14	HMPREF1058_RS05165		efflux RND transporter periplasmic adaptor subunit	no	0.37
15	HMPREF1058_RS08725		SusC/RagA family TonB-linked outer membrane protein	no	0.37
16	HMPREF1058_RS10985		RNA methyltransferase	0.57	0.37
17	HMPREF1058_RS09185		DUF4252 domain-containing protein	no	0.37
18	HMPREF1058_RS14660		TolC family protein	no	0.36
19	HMPREF1058_RS06085		hypothetical protein	no	0.36
20	HMPREF1058_RS18425		ABC-F family ATP-binding cassette domain-containing protein	no	0.36

Or look for negative cofitness