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Cofit
Protein
Homologs
Top cofit genes for HMPREF1058_RS03095 from
Phocaeicola vulgatus CL09T03C04
RNA-binding protein
SEED: RNA binding protein
Rank
Hit
Name
Description
Conserved?
Cofitness
1
HMPREF1058
_RS15910
thioredoxin
no
0.30
2
HMPREF1058
_RS05230
RNA methyltransferase
no
0.29
3
HMPREF1058
_RS00505
hypothetical protein
no
0.29
4
HMPREF1058
_RS12130
DUF2807 domain-containing protein
no
0.28
5
HMPREF1058
_RS02190
ABC transporter permease
no
0.28
6
HMPREF1058
_RS04010
molecular chaperone HtpG
no
0.28
7
HMPREF1058
_RS01525
helix-turn-helix transcriptional regulator
no
0.28
8
HMPREF1058
_RS14855
hypothetical protein
no
0.27
9
HMPREF1058
_RS01465
putative transporter
no
0.27
10
HMPREF1058
_RS10580
beta-ketoacyl-[acyl-carrier-protein] synthase family protein
no
0.27
11
HMPREF1058
_RS03805
PorT family protein
no
0.27
12
HMPREF1058
_RS15105
glycoside hydrolase family 97 protein
no
0.26
13
HMPREF1058
_RS04360
DUF308 domain-containing protein
no
0.26
14
HMPREF1058
_RS05115
aspartyl protease family protein
no
0.26
15
HMPREF1058
_RS14440
FecR domain-containing protein
no
0.26
16
HMPREF1058
_RS01905
hypothetical protein
no
0.26
17
HMPREF1058
_RS01460
acyl-CoA carboxylase subunit beta
no
0.26
18
HMPREF1058
_RS10605
acyl-CoA thioesterase
no
0.25
19
HMPREF1058
_RS0119735
hypothetical protein
no
0.25
20
HMPREF1058
_RS05250
transposase
no
0.25
Or look for
negative cofitness