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Cofit
Protein
Homologs
Top cofit genes for Psest_1007 from
Pseudomonas stutzeri RCH2
Predicted permeases
SEED: Auxin Efflux Carrier
Rank
Hit
Name
Description
Conserved?
Cofitness
1
Psest
_2433
alpha-glucan phosphorylases
no
0.27
2
Psest
_0126
type VI secretion protein, VC_A0111 family
no
0.24
3
Psest
_2447
Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases)
no
0.24
4
Psest
_1478
Predicted membrane protein
no
0.23
5
Psest
_1553
hypothetical protein
no
0.23
6
Psest
_2000
Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases)
0.38
0.22
7
Psest
_3559
thioredoxin
no
0.22
8
Psest
_1324
Arabinose efflux permease
no
0.22
9
Psest
_2105
Response regulator containing CheY-like receiver domain and AraC-type DNA-binding domain
no
0.22
10
Psest
_0264
monofunctional biosynthetic peptidoglycan transglycosylase
no
0.21
11
Psest
_0693
His Kinase A (phosphoacceptor) domain./PAS fold./Response regulator receiver domain./Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase.
no
0.21
12
Psest
_2906
tRNA_Thr_CGT
no
0.21
13
Psest
_3248
Glucose/sorbosone dehydrogenases
no
0.21
14
Psest
_0110
malonate transporter, MadM subunit
no
0.20
15
Psest
_3235
Protein of unknown function (DUF1329).
no
0.20
16
Psest
_3043
periplasmic nitrate (or nitrite) reductase c-type cytochrome, NapC/NirT family
no
0.20
17
Psest
_2728
Acyl-CoA dehydrogenases
no
0.20
18
Psest
_0999
Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains
no
0.20
19
Psest
_2479
Methyl-accepting chemotaxis protein
no
0.20
20
Psest
_4223
Predicted membrane-associated, metal-dependent hydrolase
no
0.20
Or look for
negative cofitness