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  • Top cofit genes for Psest_1002 from Pseudomonas stutzeri RCH2

    glutamyl-queuosine tRNA(Asp) synthetase
    SEED: glutamyl-Q-tRNA synthetase
    KEGG: glutamyl-Q tRNA(Asp) synthetase

    Rank Hit Name Description Conserved? Cofitness  
    1 Psest_1804 Superfamily II DNA and RNA helicases 0.53 0.34
    2 Psest_3235 Protein of unknown function (DUF1329). no 0.32
    3 Psest_0717 Protein of unknown function (DUF1631). 0.40 0.31
    4 Psest_0495 HDOD domain. no 0.31
    5 Psest_4338 Fe2+-dicitrate sensor, membrane component no 0.31
    6 Psest_2551 1-aminocyclopropane-1-carboxylate deaminase no 0.31
    7 Psest_4008 PAS domain S-box no 0.31
    8 Psest_1725 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain 0.54 0.30
    9 Psest_2900 hypothetical protein no 0.30
    10 Psest_3440 16S RNA G1207 methylase RsmC 0.49 0.30
    11 Psest_0321 Predicted membrane protein no 0.30
    12 Psest_3217 PAS domain S-box no 0.30
    13 Psest_0923 Glutaredoxin, GrxC family no 0.29
    14 Psest_3538 hypothetical protein no 0.29
    15 Psest_0487 Uncharacterized protein conserved in bacteria 0.22 0.29
    16 Psest_3472 Long-chain acyl-CoA synthetases (AMP-forming) no 0.29
    17 Psest_0446 hypothetical protein no 0.28
    18 Psest_0110 malonate transporter, MadM subunit no 0.28
    19 Psest_3216 diguanylate cyclase (GGDEF) domain 0.18 0.28
    20 Psest_0696 hypothetical protein 0.38 0.28

    Or look for negative cofitness