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  • Top cofit genes for Psest_0926 from Pseudomonas stutzeri RCH2

    Transcriptional regulator
    SEED: Transcriptional regulator, LysR family

    Rank Hit Name Description Conserved? Cofitness  
    1 Psest_3165 diguanylate cyclase (GGDEF) domain no 0.29
    2 Psest_0949 Site-specific recombinase XerD no 0.26
    3 Psest_1006 dTDP-4-dehydrorhamnose reductase no 0.26
    4 Psest_0703 diguanylate cyclase (GGDEF) domain no 0.25
    5 Psest_1274 Endonuclease I 0.50 0.25
    6 Psest_2279 coenzyme PQQ biosynthesis protein E no 0.24
    7 Psest_0711 ATP-dependent chaperone ClpB no 0.24
    8 Psest_0441 Subtilisin-like serine proteases no 0.23
    9 Psest_2314 Mg2+ and Co2+ transporters no 0.23
    10 Psest_2295 Predicted permeases no 0.23
    11 Psest_1470 succinyldiaminopimelate transaminase no 0.23
    12 Psest_1766 Signal transduction histidine kinase no 0.23
    13 Psest_2294 nitrite reductase, copper-containing no 0.22
    14 Psest_1096 hypothetical protein no 0.22
    15 Psest_0445 PAS domain S-box/diguanylate cyclase (GGDEF) domain no 0.22
    16 Psest_0935 hypothetical protein no 0.22
    17 Psest_0589 Uncharacterized protein conserved in bacteria no 0.22
    18 Psest_2358 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) 0.60 0.21
    19 Psest_2075 Arginine/lysine/ornithine decarboxylases no 0.21
    20 Psest_1311 Branched-chain amino acid ABC-type transport system, permease components no 0.21

    Or look for negative cofitness