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Cofit
Protein
Homologs
Top cofit genes for Psest_0872 from
Pseudomonas stutzeri RCH2
Helix-turn-helix.
Rank
Hit
Name
Description
Conserved?
Cofitness
1
Psest
_2085
Periplasmic serine proteases (ClpP class)
no
0.20
2
Psest
_3071
Acyl CoA:acetate/3-ketoacid CoA transferase, beta subunit
no
0.18
3
Psest
_2740
Acyl carrier protein phosphodiesterase
no
0.18
4
Psest
_4056
FMN reductase, SsuE family
no
0.17
5
Psest
_2930
asparagine synthase (glutamine-hydrolyzing)
no
0.17
6
Psest
_4206
Putative NADPH-quinone reductase (modulator of drug activity B)
no
0.17
7
Psest
_0133
type VI secretion protein, VC_A0107 family
no
0.17
8
Psest
_2749
Predicted transcriptional regulators
no
0.17
9
Psest
_0066
Protein of unknown function (DUF3060).
no
0.16
10
Psest
_0801
CBS-domain-containing membrane protein
no
0.16
11
Psest
_0357
Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases)
no
0.16
12
Psest
_2853
hypothetical protein
no
0.16
13
Psest
_1717
benzoate transporter
no
0.15
14
Psest
_3017
Predicted phosphohydrolases
no
0.15
15
Psest
_1649
Predicted exonuclease of the beta-lactamase fold involved in RNA processing
no
0.15
16
Psest
_3222
Putative threonine efflux protein
no
0.15
17
Psest
_0384
outer membrane porin, OprD family.
no
0.15
18
Psest
_1018
ribosomal protein L11 methyltransferase
no
0.15
19
Psest
_3564
Uncharacterized protein conserved in bacteria
no
0.15
20
Psest
_2047
Signal transduction histidine kinase
no
0.15
Or look for
negative cofitness