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Top cofit genes for Psest_0080 from
Pseudomonas stutzeri RCH2
Predicted aminopeptidase
SEED: PUTATIVE ZINC PROTEASE PROTEIN
Rank
Hit
Name
Description
Conserved?
Cofitness
1
Psest
_0404
phytoene desaturase
no
0.26
2
Psest
_3464
Signal transduction histidine kinase
0.26
0.25
3
Psest
_3699
Dehydrogenases (flavoproteins)
no
0.25
4
Psest
_2623
Flp pilus assembly protein TadG
no
0.24
5
Psest
_2635
choline/carnitine/betaine transport
no
0.23
6
Psest
_0382
Uncharacterized iron-regulated membrane protein
0.65
0.23
7
Psest
_0657
Chemotaxis protein histidine kinase and related kinases
no
0.23
8
Psest
_1584
Arabinose efflux permease
0.24
0.22
9
Psest
_0650
RNA polymerase sigma factor, sigma-70 family
no
0.22
10
Psest
_1072
TRAP transporter, DctM subunit
no
0.21
11
Psest
_1790
ABC-type antimicrobial peptide transport system, ATPase component
no
0.21
12
Psest
_2412
Predicted phosphatase
no
0.20
13
Psest
_0380
TonB-dependent siderophore receptor
no
0.20
14
Psest
_0384
outer membrane porin, OprD family.
0.53
0.20
15
Psest
_3887
Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit
no
0.19
16
Psest
_2423
Uncharacterized conserved protein
no
0.19
17
Psest
_2369
Transcriptional regulator
no
0.19
18
Psest
_3894
Carbon starvation protein, predicted membrane protein
no
0.19
19
Psest
_2627
hypothetical protein
no
0.19
20
Psest
_0921
AraC-type DNA-binding domain-containing proteins
no
0.19
Or look for
negative cofitness