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  • Top cofit genes for Psest_0073 from Pseudomonas stutzeri RCH2

    ABC-type multidrug transport system, ATPase and permease components
    SEED: Transport ATP-binding protein CydCD
    KEGG: ATP-binding cassette, subfamily B, bacterial

    Rank Hit Name Description Conserved? Cofitness  
    1 Psest_0770 alkylphosphonate utilization operon protein PhnA no 0.25
    2 Psest_0233 hypothetical protein no 0.25
    3 Psest_0891 Uncharacterized protein conserved in bacteria no 0.22
    4 Psest_1455 diguanylate cyclase (GGDEF) domain no 0.21
    5 Psest_4052 ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component no 0.21
    6 Psest_0079 hypothetical protein no 0.21
    7 Psest_3577 Predicted carboxypeptidase no 0.20
    8 Psest_0056 Glutathione S-transferase no 0.20
    9 Psest_3660 PAS domain S-box no 0.20
    10 Psest_3081 ATP-dependent protease La no 0.20
    11 Psest_0321 Predicted membrane protein no 0.20
    12 Psest_4348 Heme oxygenase no 0.20
    13 Psest_0247 NAD-dependent aldehyde dehydrogenases no 0.19
    14 Psest_1924 adhesin-associated MmpL efflux pump (from data) no 0.19
    15 Psest_3452 Zn-dependent hydrolases, including glyoxylases no 0.19
    16 Psest_4249 Rhs element Vgr protein no 0.19
    17 Psest_2873 competence/damage-inducible protein CinA C-terminal domain 0.24 0.19
    18 Psest_3966 Predicted thioesterase no 0.19
    19 Psest_2566 Uncharacterized protein conserved in bacteria no 0.18
    20 Psest_3538 hypothetical protein no 0.18

    Or look for negative cofitness