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  • Top cofit genes for Psest_0741 from Pseudomonas stutzeri RCH2

    drug resistance transporter, Bcr/CflA subfamily
    SEED: Multidrug resistance transporter, Bcr/CflA family
    KEGG: MFS transporter, DHA1 family, bicyclomycin/chloramphenicol resistance protein

    Rank Hit Name Description Conserved? Cofitness  
    1 Psest_1100 Type I site-specific restriction-modification system, R (restriction) subunit and related helicases no 0.33
    2 Psest_1885 hypothetical protein 0.61 0.32
    3 Psest_1097 hypothetical protein no 0.30
    4 Psest_0231 phosphoesterase, MJ0936 family 0.40 0.29
    5 Psest_0728 hydrolase, TatD family 0.45 0.28
    6 Psest_0736 Methyl-accepting chemotaxis protein 0.25 0.27
    7 Psest_4169 ATPase FliI/YscN family no 0.27
    8 Psest_2618 Flp pilus assembly protein TadB no 0.27
    9 Psest_0457 Lipopolysaccharide kinase (Kdo/WaaP) family. 0.25 0.27
    10 Psest_0139 ABC-type histidine transport system, ATPase component no 0.27
    11 Psest_3528 Predicted membrane protein no 0.27
    12 Psest_3022 Predicted membrane protein no 0.26
    13 Psest_0150 ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components no 0.26
    14 Psest_1525 Uncharacterized protein conserved in bacteria 0.37 0.26
    15 Psest_4219 DNA polymerase I 0.57 0.25
    16 Psest_2051 Ribonuclease D no 0.25
    17 Psest_0552 conserved hypothetical protein, proteobacterial 0.28 0.25
    18 Psest_3767 tyrosine recombinase XerC no 0.25
    19 Psest_2610 Predicted acyltransferases no 0.24
    20 Psest_3118 endonuclease III 0.17 0.24

    Or look for negative cofitness