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  • Top cofit genes for Psest_0703 from Pseudomonas stutzeri RCH2

    diguanylate cyclase (GGDEF) domain
    SEED: Probable two-component response regulator

    Rank Hit Name Description Conserved? Cofitness  
    1 Psest_0947 Phage integrase family. no 0.41
    2 Psest_0949 Site-specific recombinase XerD no 0.39
    3 Psest_3165 diguanylate cyclase (GGDEF) domain no 0.39
    4 Psest_0935 hypothetical protein no 0.35
    5 Psest_2540 Uncharacterized protein SCO1/SenC/PrrC, involved in biogenesis of respiratory and photosynthetic systems no 0.35
    6 Psest_0441 Subtilisin-like serine proteases no 0.34
    7 Psest_1481 Predicted membrane protein no 0.33
    8 Psest_3810 orotate phosphoribosyltransferase 0.45 0.33
    9 Psest_3430 hypothetical protein no 0.32
    10 Psest_1096 hypothetical protein no 0.32
    11 Psest_0445 PAS domain S-box/diguanylate cyclase (GGDEF) domain no 0.32
    12 Psest_2294 nitrite reductase, copper-containing no 0.32
    13 Psest_4046 hypothetical protein no 0.32
    14 Psest_1482 hypothetical protein no 0.32
    15 Psest_1771 hypothetical protein no 0.31
    16 Psest_2279 coenzyme PQQ biosynthesis protein E no 0.31
    17 Psest_0262 PAS domain S-box no 0.31
    18 Psest_0701 uncharacterized radical SAM protein YgiQ 0.27 0.31
    19 Psest_1525 Uncharacterized protein conserved in bacteria 0.61 0.31
    20 Psest_4017 hypothetical protein no 0.30

    Or look for negative cofitness