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Cofit
Protein
Homologs
Top cofit genes for Psest_0696 from
Pseudomonas stutzeri RCH2
hypothetical protein
SEED: FIG003573: hypothetical protein
Rank
Hit
Name
Description
Conserved?
Cofitness
1
Psest
_3235
Protein of unknown function (DUF1329).
no
0.55
2
Psest
_3216
diguanylate cyclase (GGDEF) domain
no
0.53
3
Psest
_0446
hypothetical protein
no
0.52
4
Psest
_1725
Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain
no
0.52
5
Psest
_3976
PAS domain S-box
no
0.51
6
Psest
_2900
hypothetical protein
no
0.49
7
Psest
_3974
Anti-sigma regulatory factor (Ser/Thr protein kinase)
no
0.49
8
Psest
_0923
Glutaredoxin, GrxC family
no
0.49
9
Psest
_3217
PAS domain S-box
no
0.49
10
Psest
_0539
Acyl-CoA dehydrogenases
no
0.49
11
Psest
_0264
monofunctional biosynthetic peptidoglycan transglycosylase
0.36
0.49
12
Psest
_3900
Spermidine/putrescine-binding periplasmic protein
no
0.47
13
Psest
_1804
Superfamily II DNA and RNA helicases
0.47
0.47
14
Psest
_0360
Predicted permease, DMT superfamily
0.67
0.47
15
Psest
_1504
tol-pal system protein YbgF
0.29
0.47
16
Psest
_3472
Long-chain acyl-CoA synthetases (AMP-forming)
no
0.46
17
Psest
_3734
Uncharacterized protein involved in an early stage of isoprenoid biosynthesis
no
0.46
18
Psest
_4100
Uncharacterized protein conserved in bacteria
0.39
0.46
19
Psest
_0487
Uncharacterized protein conserved in bacteria
no
0.46
20
Psest
_3442
Beta-lactamase class A
no
0.46
Or look for
negative cofitness