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  • Top cofit genes for Psest_0691 from Pseudomonas stutzeri RCH2

    ribonuclease R
    SEED: 3'-to-5' exoribonuclease RNase R
    KEGG: ribonuclease R

    Rank Hit Name Description Conserved? Cofitness  
    1 Psest_1871 Predicted esterase of the alpha-beta hydrolase superfamily 0.43 0.49
    2 Psest_1098 Restriction endonuclease S subunits no 0.45
    3 Psest_4283 Spermidine/putrescine-binding periplasmic protein 0.53 0.44
    4 Psest_1241 S-adenosylmethionine:tRNA ribosyltransferase-isomerase 0.97 0.44
    5 Psest_2132 Outer membrane protein 0.81 0.43
    6 Psest_0998 poly(A) polymerase 0.89 0.43
    7 Psest_4389 Relaxase/Mobilisation nuclease domain. no 0.40
    8 Psest_2946 septum site-determining protein MinD 0.56 0.39
    9 Psest_1099 Type I restriction-modification system methyltransferase subunit no 0.38
    10 Psest_1531 hypothetical protein no 0.37
    11 Psest_0947 Phage integrase family. no 0.37
    12 Psest_4017 hypothetical protein no 0.34
    13 Psest_3777 diguanylate cyclase (GGDEF) domain 0.54 0.34
    14 Psest_0498 ribosome small subunit-dependent GTPase A 0.80 0.34
    15 Psest_1242 tRNA-guanine transglycosylase, queuosine-34-forming 0.79 0.33
    16 Psest_1510 Putative Zn-dependent protease, contains TPR repeats 0.54 0.33
    17 Psest_0516 D-alanyl-D-alanine carboxypeptidase 0.35 0.33
    18 Psest_0252 hypothetical protein no 0.32
    19 Psest_4070 PAS domain S-box no 0.32
    20 Psest_4396 Site-specific recombinases, DNA invertase Pin homologs no 0.32

    Or look for negative cofitness