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  • Top cofit genes for Psest_0568 from Pseudomonas stutzeri RCH2

    pseudouridine synthase
    SEED: Ribosomal large subunit pseudouridine synthase E (EC 4.2.1.70)
    KEGG: ribosomal large subunit pseudouridine synthase E

    Rank Hit Name Description Conserved? Cofitness  
    1 Psest_2666 Predicted acyl-CoA transferases/carnitine dehydratase 0.22 0.30
    2 Psest_0318 NAD-dependent DNA ligase (contains BRCT domain type II) 0.52 0.25
    3 Psest_0094 Uncharacterized enzyme of phosphonate metabolism no 0.24
    4 Psest_4295 PAS domain S-box no 0.24
    5 Psest_3886 Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit no 0.24
    6 Psest_3775 Mg chelatase-related protein 0.33 0.23
    7 Psest_1795 Flagellar motor component no 0.23
    8 Psest_4259 Multidrug resistance efflux pump no 0.23
    9 Psest_0103 triphosphoribosyl-dephospho-CoA synthase MdcB 0.39 0.22
    10 Psest_2889 Predicted flavoprotein involved in K+ transport no 0.22
    11 Psest_0040 Protein of unknown function (DUF2934). no 0.22
    12 Psest_1210 xanthine dehydrogenase, molybdopterin binding subunit 0.62 0.22
    13 Psest_0740 Transcriptional regulator no 0.22
    14 Psest_3482 Parvulin-like peptidyl-prolyl isomerase no 0.21
    15 Psest_4318 Predicted dioxygenase of extradiol dioxygenase family no 0.21
    16 Psest_2359 Predicted permeases no 0.20
    17 Psest_3966 Predicted thioesterase 0.80 0.20
    18 Psest_3695 Histidine ammonia-lyase no 0.20
    19 Psest_3478 Cytochrome B561 0.50 0.20
    20 Psest_1577 Membrane glycosyltransferase 0.37 0.20

    Or look for negative cofitness